Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1786 ATGCCTAGAAAGGGAATGAGAAGCATTTTCTTCCAACCATCCACATCCACGTCATCAAAACCTCCACCACCATCTTCACCTCTCAGAACATTCTCAGACTCCTTAATGGAAGAAAACATTGAAACCGCAGAATCACTTATAACAAAATGGGATTATTCCAAAAAAATCATTACCCCTCTTTTCAGCGGTAACACTCGTTTAGAAGCCAAACAATACCTAAACGCTGTTAAAGGTCTACAATCCGCTATGCAGTACCTTGTCACACGTGATTCCACCTCTAACGCTCTTATAAAATCTCAATTCTTAATGCAACTCGCTATGAAAACTCTTCAAAAAGAGTTTTATCAAATTCTATCGTCAAACAGAGAATATTTAGATCCTGAAACCGTTTCTAACCGTTCTTCAGTAGATCGTAGAAGAAGCAGTGTTTCATTTTCTGATTATGAAAGTGAAATCGAAATCTCCGACGACGACGAGTTTCGTGGCGTCGGAAACACGATTTCTGAGACTGAGAGAGTTTCAATGCTTGCTATGGTGGATTTGAAAGCTATTGCTGATTGTATGATATCTTCTGGCTATGGAAAAGAGTGTGTTAAGGTTTATATTGTTATGAGAAAATCGATTGTTGATGAAGCGCTTTATCATCTAGGTGTTGAACGGTTGAGTTTTTCTCAGATTCAGAAAATGGATTGGGAAGTTATTGAGTTGAAAATCAAGACGTGGCTAAACGCTGTTAAAGTTGCCGTTGGAACTCTGTTTCACGGCGAGAGGATTCTCTGCGACGACGTGTTCGCGGAGGCGTCACGGAAGAGAATCGCTGAGTCGTGTTTCGCAGAGATTACTAAAGAAGGTGCTATTTCACTTTTAACTTTCCCGGAAATGGTGGGAAAATGCAAGAAAACGCCGGAAAAAATGTTCAGAACACTTGATTTATATGAAGCAATTTCCGATCATTTACCACAAATTCAATCGATATTCTCTTTTGAATCAACTTCTAACGTCCGTTTACAAGCCGTTACATCTATGGCGAAACTCGCCGAAGCCGTTAAAACGATGTTAACGGATTTCGAATCAGCGATTCAGAAAGATTCTTCAAAGAAACCAATCACCGGCGGTGGAGTCCACCCTCTCACACGCTATGTAATCAACTACATCACGTTCCTCGCCGATTACAGCGGCGTACTTTCCAATATCATCTTCAATTTGCCTCAATCTCCGTTACCGGAATCTTACTATCAAAGCCCCATGCGCGGTGAAAACAATTCATCTTCCGATATATCAGATAAAATCGCGTGGCTTATACTCGTTGTTCTCTGTAAACTTGACGGAAAAGCTGAACTCTACAAAGACGTAGCACTTTCTTATCTTTTTCTTGCCAATAACATGCAATACGTCGTCGTAAAGGTTCGAAGATCAAACTTAGGATTTCTTCTCGGAGAAGATTGGTTAACGAATCATGAATTGAAGGTTAAAGAGTACGTGTCCAAGTTCGTGCGGGTTGGATGGAATAAAGTCTTATCGACGTTGCCGGAAAATTCCACTGTGGATATGCCGGTGGAGAAGGTTAGAGAGAGCTTTGTGAAATTCAACGCTGCTTTTGATGGAGAGTGTCGGAAACAGTCTTCGTGGGTTGTAACCGACCCGAAACTGCGAGATGAAATCAAAGGCGCGATAGGTTCAAATTTGTTGGCGAAATATGGTGGGTTTTATGAGACGAATCGGGTCGGATTGGAATCGGTTATTAGATATGAACCGGAAAATGTAGAGGGGTGTTTGTGTAATATTTTGTATGGGGTTGGAGATTCGGGTAGTGTTTCATCACATTCTTCGTCGAGGGTGTCGTCTTCTCGTGGCTCTAGTCGCCGGTGA 1869 0.4163 MPRKGMRSIFFQPSTSTSSKPPPPSSPLRTFSDSLMEENIETAESLITKWDYSKKIITPLFSGNTRLEAKQYLNAVKGLQSAMQYLVTRDSTSNALIKSQFLMQLAMKTLQKEFYQILSSNREYLDPETVSNRSSVDRRRSSVSFSDYESEIEISDDDEFRGVGNTISETERVSMLAMVDLKAIADCMISSGYGKECVKVYIVMRKSIVDEALYHLGVERLSFSQIQKMDWEVIELKIKTWLNAVKVAVGTLFHGERILCDDVFAEASRKRIAESCFAEITKEGAISLLTFPEMVGKCKKTPEKMFRTLDLYEAISDHLPQIQSIFSFESTSNVRLQAVTSMAKLAEAVKTMLTDFESAIQKDSSKKPITGGGVHPLTRYVINYITFLADYSGVLSNIIFNLPQSPLPESYYQSPMRGENNSSSDISDKIAWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGEDWLTNHELKVKEYVSKFVRVGWNKVLSTLPENSTVDMPVEKVRESFVKFNAAFDGECRKQSSWVVTDPKLRDEIKGAIGSNLLAKYGGFYETNRVGLESVIRYEPENVEGCLCNILYGVGDSGSVSSHSSSRVSSSRGSSRR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1786 622 Gene3D Exocyst complex component Exo70 45 601 - -
Tpr4g1786 622 SUPERFAMILY Cullin repeat-like 47 593 IPR016159 -
Tpr4g1786 622 MobiDBLite consensus disorder prediction 1 28 - -
Tpr4g1786 622 Pfam Exo70 exocyst complex subunit 240 592 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g1786 622 PANTHER EXOCYST COMPLEX PROTEIN EXO70 19 602 IPR004140 GO:0000145|GO:0006887
Tpr4g1786 622 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 19 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1786 Tpr-Chr4 18597583 18599858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1786 22 598 EXO70 exocyst subunit family AT5G59730 50.083 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1786 K07195 - gmx:100810579 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1786 4 18597583 18599858 Tpr4g1786 4 18597583 18599858 ECH