Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1777 ATGTTGGATTGTAGACAAGGTTGGTTGTTTATATTTATCTATGTTTCACCAATTTTTCCTTTGATGTGTTTTTCTGCAAATTTTGTTCCTATAGACAATTACCTTATAGATTGTGGATCACATACAAATACTTCAATAGGTAACCTCAATTTCACATCAGATAATTTCTTTCACAATTTCCTTTCAACACAAGAAGATATTCTTGCAAATACTTCTTTAAAATCAACCACTGATTATTCACCTCTTTATCAAACTGCAAGAATCTTAAATTCACCTTCAAAGTACACATTTCCTGTTAACAAAAAGGGTCAGCATTGGATTCGTCTTTATTTCTTTCCATTTACATATCAGAATTACAATCTTAGTGCTGCAAATTTTGCTGTTACCACTCAAAACAATGTTCTTCTTAGTAACTTTAGTGTGCCGAAAAAAGATCCTGTTATGAAGGAGTACTTAGTAAATGTCACCTTAGATACCCTTGTTATTACCTTTACCCCGTCGAACAATTCTATAGCTTTTGTTAGTGCAATTGAAGTTGTTTCTGTGCCCGATGAGCTAATTGCGGATGATGCTATGGCTTTGAATCCGCGGAGAGAGTATTCAGGATTATTGACAATGGCACTTGAGACAGTTTTTAGGGTTAACATGGGTGGTCCAAGTGTTTCCTTAGGTGCCGACCCGCTTCATCGAACTTGGGTTCCGGATACAAGCTTTCTTATACTACCTAACCTTGCTAGTAATTTTTCAAGTATAGGTGCTGTTAAATATGTAAAAGGGGGTCCAACAGAAAATATTGCTCCACCTAGTGTCTATGGTACTTTAACAGAGATGAATTCGGATGGTGATCCGCGTAGTAATTTCAATGTGACGTGGAAGTTTGATGTGGAACCGGAATTTCAATACCTTGTGCGACTTCACTTCTGTGATATAGTCAGTAAAAGTCTTAATGAACTTTATTTTAATGTTTACATTGATTCCTTGTTGGCTGCCAAGGATCTTGATCTCAGTGGAAAGACTCGTAATGTGTTGGCTACTCCGTTTTTTATGGATTTTGTTACGGAACCGTCTGTCGACAATAAAATTCTTGTAAGTATTGGCCCTTCTGATGTAAATAATGACTATCCTAATGCCATTTTGAATGGGCTAGAGATAATGAAAATGAACAACTCTAAGAGCAGTCTCAGTGCATCAACAGCGGTGTTTTTGAGCAGCAATCATGGTTCAAATTCTAAGAAAGTTGGCCTGATCGTCGGTGTGAGTCTTGGTATATTTTGTGTGGTGGTGGCATTGGTCGGAGTTTTCTTTGTACTCCGCAGAAGAAGAAGGCGGTTGGCACAACAAGGGGATTCAAAGACATGGGTTCCTTTATCGATCAACGATGGAACTTCTCACACAATGGGAAGTAAAGATTCGAAAGGCACAGTAACAAGTGCTGCTTCAAACTTTGGATATCGCTTCCCTTTTGTTGCAGTTCAAGAGGCCACAAATAATTTTGATGAGAGTTGGGTTATTGGTATAGGTGGTTTCGGTAAGGTATACAAAGGTGAATTAAACGATGGAACTAAAGTTGCTTGTAAGAGGGGGAACCCTCGGTCCCACCAGGGACTTGCAGAATTCCGAACCGAAATCGAAATGTTGTCTCAGTTTCGCCATCGCCATTTGGTATCATTGATTGGATATTGTGATGAAAGGAACGAAATGATCTTGATATATGAGTACATGGAGAACGGAACTGTTAAAAGTCATCTGTACGGTTCAGGTCTCCCCAGCTTAAGTTGGAAGCAACGGCTCGAGATATGCATTGGAGCAGCTAGGGGACTTCATTACCTTCATACCGGCTATGCTAAAGCAGTTATTCACCGCGATGTAAAGTCGGCAAATATCTTGCTTGACGAGAATCTCATGGCAAAAGTGGCCGATTTCGGTCTATCAAAGACTGGACCGGAAATCGATCAGACACACGTGAGCACAGCTGTCAAAGGGAGTTTTGGTTACCTTGATCCCGAGTATTTCAGAAGGCAACAGTTAACAGAAAAATCAGACGTGTATTCATTTGGGGTAGTTTTGCTTGAGGTTTTATGTGCAAGACCGGTTATAGACCCATCTCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCGATGAAATGGCAGAAAAGAGGAGAACTCGCACGAATCGTAGATCCAACGCTTGCAGGGAAAATCAGACCGGACTCTCTTAGGAAGTTCGCTGAGACTGCTGAAAAATGTTTGGCTGATTTTGGTGTTGATAGACCTTCAATGGGAGATGTATTGTGGAATTTGGAGTATGCTCTTCAACTGCAAGAGGCTGTTGTTCAAGGCGATCCTGATGAAAACAGTACTAATATGATCGGTGAACTATCTCCACAAATAAACAATTTTGACCATGAATCAGGCGTTTCTGTCGCACAATTTGAAGCTTCGAGTCTCAATGATCTTTCAGGTGTTTCTATGAGTAAAGTGTTCTCACAGTTAGTGAAATCCGAGGGAAGATGA 2517 0.4013 MLDCRQGWLFIFIYVSPIFPLMCFSANFVPIDNYLIDCGSHTNTSIGNLNFTSDNFFHNFLSTQEDILANTSLKSTTDYSPLYQTARILNSPSKYTFPVNKKGQHWIRLYFFPFTYQNYNLSAANFAVTTQNNVLLSNFSVPKKDPVMKEYLVNVTLDTLVITFTPSNNSIAFVSAIEVVSVPDELIADDAMALNPRREYSGLLTMALETVFRVNMGGPSVSLGADPLHRTWVPDTSFLILPNLASNFSSIGAVKYVKGGPTENIAPPSVYGTLTEMNSDGDPRSNFNVTWKFDVEPEFQYLVRLHFCDIVSKSLNELYFNVYIDSLLAAKDLDLSGKTRNVLATPFFMDFVTEPSVDNKILVSIGPSDVNNDYPNAILNGLEIMKMNNSKSSLSASTAVFLSSNHGSNSKKVGLIVGVSLGIFCVVVALVGVFFVLRRRRRRLAQQGDSKTWVPLSINDGTSHTMGSKDSKGTVTSAASNFGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTVKSHLYGSGLPSLSWKQRLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPREMVNLAEWAMKWQKRGELARIVDPTLAGKIRPDSLRKFAETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPDENSTNMIGELSPQINNFDHESGVSVAQFEASSLNDLSGVSMSKVFSQLVKSEGR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1777 838 Pfam Malectin-like domain 36 387 IPR024788 -
Tpr4g1777 838 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Tpr4g1777 838 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 21 831 - -
Tpr4g1777 838 PANTHER OS07G0166700 PROTEIN 21 831 IPR045272 GO:0004714|GO:0006468
Tpr4g1777 838 Gene3D Phosphorylase Kinase; domain 1 460 573 - -
Tpr4g1777 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Tpr4g1777 838 CDD STKc_IRAK 504 769 - -
Tpr4g1777 838 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Tpr4g1777 838 Pfam Protein tyrosine and serine/threonine kinase 503 695 IPR001245 GO:0004672|GO:0006468
Tpr4g1777 838 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1777 838 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1777 838 Gene3D - 206 389 - -
Tpr4g1777 838 Gene3D - 33 182 - -
Tpr4g1777 838 SUPERFAMILY Protein kinase-like (PK-like) 477 769 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1777 Tpr-Chr4 18450764 18454245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1777 12 838 Receptor kinase-like Gene Family AT3G46290 65.827 0.0 1082
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr4g1777 Malectin_like 3.1e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1777 - - gmx:100806488 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1777 4 18450764 18454245 Tpr4g1777 4 18450764 18454245 ECH
Tpr7g4643 7 54827758 54831279 Tpr4g1777 4 18450764 18454245 ECH
Tpr7g4442 7 53217839 53221352 Tpr4g1777 4 18450764 18454245 PCT