Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1772 ATGTATACAAACTTCAACCTAACATTCTCACGCGCCGCTTATACCCACTCCCATTTTCCGTCGACATTGCAGCAGCAGCAGAACCAACTAGGTGAATATGACTCAGCCACACAACCCAACTCGGAGGTGAATTACAGTAATGGTGGTGGTAGTGGTGATGGTGGCAGCAGGTGCAGCAGCTACATGGGATCGCCAAGTAATTACGAGGAGCGATTGATGCAGAGGAGCATTAGTAGCCACTCACTGGAAAAGAATGATGGGCACCACCATCATCATCCACACCTTTTTCCAAATTTGTTTGCTGAATTGCTTGACACGGAGAATGGTCCGGTGCGGCGAGTTTATAGTACCGGTGATCTTGATCAGAAAGTTAATGGATGGCAGCAACATTATCATCAATCAGATAGTCCTTTGTCAACAGAGAGTAACATGATAATAGAAGAAATGAGCAGAGCAGCTTGTCCTTATAGCCCAGAAGAAAAGAAGGTCAGGATTGAGAGATATAAAACCAAGAAAAACCAGAGAAATTACAACAAAAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGTAGGCCACGTATTAGGGGAAGATTTGCTAAGAATGATGAAATTGTGATTAATCCTCCAAATCAATGGAGCCATATTAGTAATAATGAAGAAGAAATATTAGAAGATGAAGAAGATGAGAATTGGGACAATTTCTTTGATTCATTGGTTCCTAGTACTACTTCAAATCTTGCTCATGAGGAGCCTCAACATAGTTCCTCCTTTGGTATATTCTAA 789 0.4132 MYTNFNLTFSRAAYTHSHFPSTLQQQQNQLGEYDSATQPNSEVNYSNGGGSGDGGSRCSSYMGSPSNYEERLMQRSISSHSLEKNDGHHHHHPHLFPNLFAELLDTENGPVRRVYSTGDLDQKVNGWQQHYHQSDSPLSTESNMIIEEMSRAACPYSPEEKKVRIERYKTKKNQRNYNKKIKYVCRKTLADSRPRIRGRFAKNDEIVINPPNQWSHISNNEEEILEDEEDENWDNFFDSLVPSTTSNLAHEEPQHSSSFGIF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1772 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 262 IPR045281 GO:0009909
Tpr4g1772 262 ProSiteProfiles CCT domain profile. 161 203 IPR010402 GO:0005515
Tpr4g1772 262 Pfam CCT motif 163 203 IPR010402 GO:0005515
Tpr4g1772 262 PANTHER CCT MOTIF PROTEIN 3 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1772 Tpr-Chr4 18415395 18419183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1772 157 206 C2C2-CO-like Transcription Factor Family AT5G15850 46.000 2.96e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr4g1772 CCT 7.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1772 - - lang:109352757 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1772 4 18415395 18419183 Tpr4g1772 4 18415395 18419183 ECH
Tpr7g4438 7 53193547 53196220 Tpr4g1772 4 18415395 18419183 PCT