Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1767 ATGAAACAGAGAGTGAAAGTGATGGAAGCATTTACAAGAGATCATCGAGGTTCACTTGAAGTCTTCAATCCATCTTCATCAGACATCAACAACGAGAATCCGAATTCGAATCCGAATCCAATCAATTCATGGAACAATTGGACAAACACACGCGCCAATGAAACTCAACAACAACCAACGCGCGACTCAATTAACTCCGATGAAGTCACCGTCTCAACTTCCTGGATGGCGCTCAAGGAAACAACTCCACCTCCGCCAATTTCCGGCAATTCAGGCTCCGCTGCAGCACAAAGAGCAGCGGAATGGGGATTAGTACTGAAAACTGATTCGGAGACGGGAAAACCACAGGGAGTGGCAGTTAGAAGCTCCGGTGGTGGTTCGAGAAGAGACTCGAATAATTCGATGAGAAGTTCCGGTGAGAGTTCCGATGATGGAAGGGAGTTTAGAGGAATACCGAGAGTTTCGGAGGATTTGAGAGATGCATTATCGGCATTTCAACAGACATTTGTTGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCTAGTGCCGGGTTTTTTAATATGACGGGTTATACTTCTAAAGAAGTCATTGGAAGAAATTGTCGGTTTATGCAGGGAGCTGATACGGATCCAAATGACGTGGCAAAAATAAGAGAAGCTTTAGCAGCGGGAACGACTTATTGTGGAAGGTTACTAAATTACAAGAAGGATGGGACACCCTTTTGGAACCTTCTCACTATTGCTCCCATCAAGGACGAACATGGCAAAATCCTCAAACTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACAGAGGGGACCAAGGAGAAGATGTTACGTCCCAATGGATTGCCCGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAAACTCATCAGTAAGTGAGTTGGTGGAAGCAGTGAGCAAAAGACCAAGGTCACTCAGTGAATCAACAAACCATCTTCCCTTCATCAAAACCCCAACAACGGTTCTACACGGTGGTGGCGGTAAAAATGATCATGGAAAAAAACTAAACAAGAAACTATCCAATTCCTCAAGGAGAAAATCTGAGAGTACTTTACCTTCATTTAGACGTAAATCACATTCAGGATCAGGAGGTGACACTTTTAATTCAATGCAATCCATCACGGAGACCCCCGAAAACAAAAACAACTCGCGTCGCCGTTCTTTCATGGGGTTGATTAGGAAAAGTCAATCAAACAATGAAAGCTTCAATGATGATGAACAAGTTATTGATGCCGATAGCTCTGAGGAAGATGAAAGGTCTGATAGTTTTGATGACAAAATCACAAAAAAGAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTCGAACGTATCGAAAAGAACTTTGTCATTACTGATCCAAGGCTCCCTGATAACCCCATTATCTTTGCATCTGATAGTTTCTTAGAGCTTACAGAGTATTCTCGTGAAGAAATATTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACAGATCCTGCAACAGTGAAAAAAATTAGACATGCTATTGACAATCAAACAGAAGTTACTGTGCAACTTATTAATTATACAAAGAGTGGTAAAAAGTTTTGGAACCTATTTCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAATATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGATGATACAGCAAAGGAGGGAGAAAATTTGGTGAAAAAAACTGCAGAAAATGTTGATGATGCATTGAGAGAACTACCAGATGCTAATATGAAACCAGAAGATCTATGGATGAATCACTCAAAAGTGGTTCTCCCTAAACCTCATAGGAGGGATGATGTTGCTTGGAGAGCTATTCAAAAGATTATGGAGAGTGGAGAGCAAATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGCTCAGGCGACACCGGAAGTGTCCATCTGGTAGAGCTATGTGGAACTAATCAACAGTTTGCCATGAAGGCTATGGAGAAGAGTGTTATGCTCAATCGTAATAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTAGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCTTTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGAGGAGAACTATTCTTGCTTCTTGAGCGCCAGCCAGCAAAGGTTCTCAAAGAAGATGCAGTGAGATTTTATACCTCTGAAGTAGTTGTTGCATTGGAGTACCTTCATTGTCAAGGTATAATATATCGAGATTTGAAGCCAGAAAATGTGTTACTACAAAGCAGTGGACATGTGGCTCTAACAGATTTTGATCTGTCATGTTTAACATCTTGCAAACCACAGCTTTTGATTCCAACTACAAATGACAAGAAGAAAGGCCAACAGGCTCCAATATTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCACCGGAAATTATAACTGGGTCTGGCCATACTAGTGCTGTCGATTGGTGGGCTCTCGGAATTCTTCTCTATGAAATGATTTATGGATATACACCATTTAGAGGAAAGAATAGGCAAAGAACATTTTCAAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGGTAAGTCTGAGTGCAAAACAGTTGATTTATCACTTATTGCAAAGAGATCCAAGTAGCAGATTGGGTTCAAAGGGAGGAGCAAATGATATTAAAAACCATTCATTCTTCAGAGGTGTCAATTGGGCCCTAGTTAGATGCACGAAACCTCCTGAGCTAGATGCTCCTCTCTTTGATACAAATGGAGAAAAAATGGAAAACGAGGCCAAATATATAGATAATGGTCAAGAGGATATGAGTGTCTTTTGA 2943 0.4115 MKQRVKVMEAFTRDHRGSLEVFNPSSSDINNENPNSNPNPINSWNNWTNTRANETQQQPTRDSINSDEVTVSTSWMALKETTPPPPISGNSGSAAAQRAAEWGLVLKTDSETGKPQGVAVRSSGGGSRRDSNNSMRSSGESSDDGREFRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREALAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVSELVEAVSKRPRSLSESTNHLPFIKTPTTVLHGGGGKNDHGKKLNKKLSNSSRRKSESTLPSFRRKSHSGSGGDTFNSMQSITETPENKNNSRRRSFMGLIRKSQSNNESFNDDEQVIDADSSEEDERSDSFDDKITKKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRHAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVLPKPHRRDDVAWRAIQKIMESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTNQQFAMKAMEKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVRFYTSEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVALTDFDLSCLTSCKPQLLIPTTNDKKKGQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMIYGYTPFRGKNRQRTFSNILHKDLKFPKSKQVSLSAKQLIYHLLQRDPSSRLGSKGGANDIKNHSFFRGVNWALVRCTKPPELDAPLFDTNGEKMENEAKYIDNGQEDMSVF* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1767 980 MobiDBLite consensus disorder prediction 125 139 - -
Tpr4g1767 980 Gene3D Phosphorylase Kinase; domain 1 650 734 - -
Tpr4g1767 980 ProSiteProfiles PAS repeat profile. 450 523 IPR000014 -
Tpr4g1767 980 MobiDBLite consensus disorder prediction 107 148 - -
Tpr4g1767 980 TIGRFAM sensory_box: PAS domain S-box protein 181 274 IPR000014 -
Tpr4g1767 980 TIGRFAM sensory_box: PAS domain S-box protein 475 565 IPR000014 -
Tpr4g1767 980 MobiDBLite consensus disorder prediction 317 331 - -
Tpr4g1767 980 SMART pac_2 527 569 IPR001610 -
Tpr4g1767 980 SMART pac_2 231 273 IPR001610 -
Tpr4g1767 980 MobiDBLite consensus disorder prediction 19 41 - -
Tpr4g1767 980 Pfam PAS domain 473 565 IPR000014 -
Tpr4g1767 980 Pfam PAS domain 175 271 IPR000014 -
Tpr4g1767 980 SUPERFAMILY PYP-like sensor domain (PAS domain) 466 565 IPR035965 -
Tpr4g1767 980 PANTHER FLIPPASE KINASE 1-RELATED 104 976 - -
Tpr4g1767 980 CDD PAS 465 565 IPR000014 -
Tpr4g1767 980 ProSiteProfiles PAC domain profile. 228 282 IPR000700 -
Tpr4g1767 980 Gene3D PAS domain 439 603 - -
Tpr4g1767 980 Coils Coil 582 602 - -
Tpr4g1767 980 Gene3D PAS domain 168 327 - -
Tpr4g1767 980 SMART serkin_6 651 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1767 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Tpr4g1767 980 MobiDBLite consensus disorder prediction 420 434 - -
Tpr4g1767 980 MobiDBLite consensus disorder prediction 369 419 - -
Tpr4g1767 980 ProSiteProfiles PAS repeat profile. 154 224 IPR000014 -
Tpr4g1767 980 PANTHER PHOTOTROPIN-1 104 976 - -
Tpr4g1767 980 MobiDBLite consensus disorder prediction 342 368 - -
Tpr4g1767 980 MobiDBLite consensus disorder prediction 303 442 - -
Tpr4g1767 980 SMART pas_2 156 225 IPR000014 -
Tpr4g1767 980 SMART pas_2 452 521 IPR000014 -
Tpr4g1767 980 ProSiteProfiles Protein kinase domain profile. 651 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1767 980 CDD STKc_phototropin_like 649 954 - -
Tpr4g1767 980 Gene3D Transferase(Phosphotransferase) domain 1 735 946 - -
Tpr4g1767 980 ProSitePatterns Protein kinases ATP-binding region signature. 657 680 IPR017441 GO:0005524
Tpr4g1767 980 SUPERFAMILY Protein kinase-like (PK-like) 633 954 IPR011009 -
Tpr4g1767 980 SUPERFAMILY PYP-like sensor domain (PAS domain) 174 271 IPR035965 -
Tpr4g1767 980 CDD PAS 181 270 IPR000014 -
Tpr4g1767 980 Pfam Protein kinase domain 653 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1767 980 ProSiteProfiles PAC domain profile. 524 578 IPR000700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1767 Tpr-Chr4 18337150 18348922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1767 13 977 AGC Kinase Gene Family AT3G45780 68.962 0.0 1343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr4g1767 Pkinase 3.8e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1767 4 18337150 18348922 Tpr4g1767 4 18337150 18348922 ECH
Tpr7g4433 7 53124605 53137404 Tpr4g1767 4 18337150 18348922 PCT