Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1765 ATGAGTTCCGGTAAGGAAATTGCTGAAAGCAACCCGCTGAATCCTCCCCCGCTGCAAGCCTCTTCCGCCGCAAATAGGGAAACGGTGACTTTAAATATAACAAACAAGGAGATACGTGATTTCAATTATAGAGAGCTTTCCGTTGCTACAAGCAAATTTAAAATTAGTAAATATTTGGGTGCCGGTGGTTTCGGCAATGTTTACCGTGCAAGCTTGGATTCAATAAAACAGGATGTAGCTATAAAGAAACTTGACCTAAAGGGTAATCAAGGAATTGCAGAATTTGTTGCCGAAGTAGAGATATTGAGTAATATAAGGCATGAAAGTATTATCCAATTGATTGGCTACAGTAATGATCGTGATGGCCAACTTATAGTTTACGAGCTCGCGACTTTGGGATGTTTGGAAAGTTTTTTATTTGAGAGTCCCTCGGGTAAACTACCTAAAGTTCTTGATTGGAATGTAAGATTGAAGATAGCAACTGAAACTGCAGAAGCTGTGCAGTATTTACATGAACAAGCAAACCCACCTATAATCCATCGTGACTTAAAGTGCTCGAATATATTGTTAGGGGATGGATACAAAGTAAAACTATCAGATTTTGGTTTAGCTATTTTAGGTCCAAATGGGGACAAGACTTTTGTTCAAACAGCCCCTCTTGGAACAGAAGGGTATTGTGAAGACCTGACAATAAGAAATATTTGCCGGAATGGGCAAAACCATCATTCAATGATATGA 738 0.3902 MSSGKEIAESNPLNPPPLQASSAANRETVTLNITNKEIRDFNYRELSVATSKFKISKYLGAGGFGNVYRASLDSIKQDVAIKKLDLKGNQGIAEFVAEVEILSNIRHESIIQLIGYSNDRDGQLIVYELATLGCLESFLFESPSGKLPKVLDWNVRLKIATETAEAVQYLHEQANPPIIHRDLKCSNILLGDGYKVKLSDFGLAILGPNGDKTFVQTAPLGTEGYCEDLTIRNICRNGQNHHSMI* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1765 245 Pfam Protein tyrosine and serine/threonine kinase 54 207 IPR001245 GO:0004672|GO:0006468
Tpr4g1765 245 SMART serkin_6 53 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1765 245 PANTHER OS07G0668900 PROTEIN 24 227 - -
Tpr4g1765 245 ProSiteProfiles Protein kinase domain profile. 53 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1765 245 SUPERFAMILY Protein kinase-like (PK-like) 30 226 IPR011009 -
Tpr4g1765 245 Gene3D Phosphorylase Kinase; domain 1 17 129 - -
Tpr4g1765 245 MobiDBLite consensus disorder prediction 1 26 - -
Tpr4g1765 245 Gene3D Transferase(Phosphotransferase) domain 1 132 233 - -
Tpr4g1765 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Tpr4g1765 245 PANTHER OS03G0283900 PROTEIN 24 227 - -
Tpr4g1765 245 ProSitePatterns Protein kinases ATP-binding region signature. 59 83 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1765 Tpr-Chr4 18301367 18302921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1765 3 226 Glycoside Hydrolase AT3G07070 43.363 4.82e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr4g1765 PK_Tyr_Ser-Thr 4.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1765 - - osa:4344400 211.846