Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1764 ATGAACAATAATGTTGGGAAAAAGAGTTTGGTAGAACAAAATCATGTGCTTATTGACAGAAAGAGTTTAAATAATAGAGTAGTTAAGGAAGGGCCAGGCTCTGAATCATCAACTGAAAATGACACAAGATTTAGTAAGGTAACGAAAGATGAAAACAATGGGTTGAAGGGATCAGTTCAAATCCATGAGAGGTTGCAGATTTCACAACAACCACTACCTCGAAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGCCGACGATGATGATTCAACACGCAATGTTGTGTGTGCGTTGTTAAGGAATTGTGGTTATGAAGTCACTGCTGTTTCCAATGGTCTCCAAGCGTGGCAAACTCTAGAAGATCCAGAAAATCGCATTGATCTTGTTCTAACAGAGGTATCTATGCCTTGTGTGTCTGGCATAAGTCTTTTGTGCAAGATCATGAGCCACGTATCTCTGAAGAATATTCCTGTGATTATGATGTCTTCTCACGATTCTATGGGTATAGTCTTTAAGTGCTTGTCAAAAGGTGCAGCTGATTTTTTAGTGAAACCTATCCGGAGGAATGAACTTAAAAACATCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGTGATAGTGGGAGTGAAAGTGGGACAAACACCCGGAAATTTGCAAAGTCAAGAAGCATTTGTGCATATGACAACAATAGTGGTAGCAATGATGAGAATGATTATGGAAGCAGAGGCTTGAGTACTCGAGATGGAAGTGACAAAGGAAGCGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAATCTCATGATACTCCTGATAGCACGTGTGCCCAAGTGGTGTACACAAAGCCTGAAAACAGTAGCAGTGTGCAGATCCATGCCACAGAAAAAGAGTGCCATGAACCAATTGATCATCCTGATGAGATTGCAATGGGTAAAGATTTAGCAATGGGAATATCTTTGAACATGCAAGAAGGCCATCCACTTAAGAAACTGTCTAACAATCCAATGCATAAAGGGGTTAATAAGATGTCTGATATCGATGGTATGCAGCTCATTAAAGGACAGAGTAATGTCTGTGACAAAGTACAACCGGAGGATGACAGTGATAAAACCAGGATGCAGGAAAATCAAACTATGAATGTTGGTGTTACTGATAGCAGCAGTCCACAGGCTGAAAGCAGAGGTTTGAACACTTCAAACGGTTTTTCTGGTTTTGCCAAAACAAAAGCAAGTTGTTGCTTCGAACAGCATCCATCGCTTGACCTAACATTAAAAAGGATGGGAGAAGTAAAAGATGCTGAACTTGTCACAGGTGATGAAAGTAATGTTTTAAGACATTCAGATCTGTCAGCATTCTCCAAATATAATACAACTTCTGCTTACCAGGCTCAAACTGGAAATGTAGGAAGCTGTTCCCCGCTAGACAATAGCTCAGTTGCACCTAATACAGAGACAATACAGAACTTCACATCTCATTCAAATGCCACTCCTCCAAATCAACAGTCTAATGGGAGCAACAACATCAGTGACCTGGCTTACACTAATATATATCTTAGCACCAAACATGAAAATTTTGACATGAAACCCGAGTCTGCCAGAGGGATTGGCTCTTTTATTTATTCTGAACACCAAACCGTGCAAAATAACAGTATCTCTGCATCTCAGAAGAAGACTTCTTCCCAGGAAGAATGTGCCGGAATCATTAAAGGACAGGTAGGAGGCTCTGAACCAGGATTCCAAGTTGAGCACACTCACCATCAACTTCAACATTGTAATCGCATCGCTCACAAGGCTGCAGAAGATCTCCAATCAGTTCATGATCTCTTACATAAAAGCACGGCCAAATTTGCTCAGCAATGTATGTCATCAAATGTGTTTGGAGGGCCAGAAGAAGGTAATGCTGCTGCAAACTATGGCTTGGATGGAAGTGCAGCTGAGAGTGATCATGGGAGCAATGGACAGGGTGGAAGCAACACTTTGACTGTCAGAATGACAAATGTGGAAAATGGTGATGCAGGAGCTGGGAGCTTTGGAGTTGGTGGCATTGATAAAATAAACATTGGAAGTGTGTCATATGAAGAACGAATTGCATTGAGAGAGGCTGCCTTGACAAAATTTCGACTAAAGAGAAAAGAAAGATGCTTTGAGAAGAAGGTTAGATATCACAGCAGGAAAAAATTGGCAGACCAGCGGCCACGTATTAGGGGACAATTTGTCAAACAAATAGTGTCTGACACTAAAGAAGAAGAAAATAAAGAAAGCGAGGACCTTGTATCTATGGATAATTCTAGTGATGTTCCACAGCAATACCAATCAAAATCATGA 2355 0.4081 MNNNVGKKSLVEQNHVLIDRKSLNNRVVKEGPGSESSTENDTRFSKVTKDENNGLKGSVQIHERLQISQQPLPRNPVTYWEKFLPVTSIKVLLADDDDSTRNVVCALLRNCGYEVTAVSNGLQAWQTLEDPENRIDLVLTEVSMPCVSGISLLCKIMSHVSLKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNIWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSNDENDYGSRGLSTRDGSDKGSGTQSSWTTNLAQSHDTPDSTCAQVVYTKPENSSSVQIHATEKECHEPIDHPDEIAMGKDLAMGISLNMQEGHPLKKLSNNPMHKGVNKMSDIDGMQLIKGQSNVCDKVQPEDDSDKTRMQENQTMNVGVTDSSSPQAESRGLNTSNGFSGFAKTKASCCFEQHPSLDLTLKRMGEVKDAELVTGDESNVLRHSDLSAFSKYNTTSAYQAQTGNVGSCSPLDNSSVAPNTETIQNFTSHSNATPPNQQSNGSNNISDLAYTNIYLSTKHENFDMKPESARGIGSFIYSEHQTVQNNSISASQKKTSSQEECAGIIKGQVGGSEPGFQVEHTHHQLQHCNRIAHKAAEDLQSVHDLLHKSTAKFAQQCMSSNVFGGPEEGNAAANYGLDGSAAESDHGSNGQGGSNTLTVRMTNVENGDAGAGSFGVGGIDKINIGSVSYEERIALREAALTKFRLKRKERCFEKKVRYHSRKKLADQRPRIRGQFVKQIVSDTKEEENKESEDLVSMDNSSDVPQQYQSKS* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1764 784 MobiDBLite consensus disorder prediction 754 769 - -
Tpr4g1764 784 ProSiteProfiles CCT domain profile. 709 751 IPR010402 GO:0005515
Tpr4g1764 784 MobiDBLite consensus disorder prediction 375 404 - -
Tpr4g1764 784 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 30 745 - -
Tpr4g1764 784 MobiDBLite consensus disorder prediction 255 282 - -
Tpr4g1764 784 ProSiteProfiles Rhodanese domain profile. 103 134 IPR001763 -
Tpr4g1764 784 SUPERFAMILY CheY-like 88 215 IPR011006 -
Tpr4g1764 784 MobiDBLite consensus disorder prediction 22 45 - -
Tpr4g1764 784 MobiDBLite consensus disorder prediction 754 784 - -
Tpr4g1764 784 MobiDBLite consensus disorder prediction 384 404 - -
Tpr4g1764 784 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
Tpr4g1764 784 Gene3D - 88 244 - -
Tpr4g1764 784 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 745 IPR045279 GO:0009736
Tpr4g1764 784 Pfam CCT motif 709 751 IPR010402 GO:0005515
Tpr4g1764 784 SMART REC_2 89 204 IPR001789 GO:0000160
Tpr4g1764 784 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Tpr4g1764 784 MobiDBLite consensus disorder prediction 770 784 - -
Tpr4g1764 784 CDD psREC_PRR 91 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1764 Tpr-Chr4 18291203 18298021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1764 36 481 Response Regulator Gene Family AT5G60100 43.137 9.35e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Tpr4g1764 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1764 K12129 - gmx:100785796 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1764 4 18291203 18298021 Tpr4g1764 4 18291203 18298021 ECH