Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr4g1750 | ATGAAGCGTGCAAGAACTACAGAAGATTCTACCTTTTCTAGGGTTTCACCATCTCTTGAAGCTGGAATCATCAAGAAGCTTCGGTTAGAGAATTTTATGTGCCATTCAAACCACGAAACTGTATTTGGAAACCACGTTAATCTCATCACTGGTCAAAATGGAAGTGGTAAAAGTGCAATACTTACTGCATTATGTGTTGCATTTGGTTGTCGAGCTAAAGGGACTCAAAGAGCATCTACTTTGAAGGATTTCATTAAAACTGGTTCTAGTAATGCTGTCATCCATGTTGAAATTCAAAATGAAGGAGAGGATGCTTTCAAGCCTGAAATATATGGCGATGTTATCATTGTAGAACGTAGGATATCTGAATCCACAAGCTCTATTATATTGAAAGATTGCCAAGGAAGGAAAGTTTTCAATCGGAAAGCAGATCTACTAGAAATCATTGAACATTTCAATATTGATGTGGAGAACCCGTGTGTGATTATGAGTCAAGACAAAAGCCGAGAATTTCTGCATTCCGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCTGCTGAAATAACCTCTGCACGTTCAATAGTTGAAGATTTAGGGTCTGCAATAAGACCTATAGAGAAAGAACTCATTGAGCTGCAAGTTAAAATTAAAACGATGGAACATATTGAACAAATTTCTGTAGAGGTTCAGCAATTAAAAAAGAAACTTGCATGGTCATGGGTTTATGATGTGGACAAGAAACTCGAGGATCAAAATGTAAGGATTCAAAAGCTGAAGGATCGGGTTCCTTTATGCCAAGCTAGGATTGATAAACAACTGCATCTGCTTGATAAATTAAGTGAAAGCTGCTCTAAGAAGAAAGCTGAAATTGAAAGTATGATGTCATCCCAAGTTAAACAAATGAAGGAAAATTTGAGCCACTCTATGTCCTTGGCAAAAAAAGAAGCATTTGCACTTCAGCAAGACAGCAAATGCAAAGCTAGTAAAATACAGAAGATGGTACAACAGCTCAAAACGCTTGAACTACAAGTGCAGGATATTCATGAGCAGCATGTGAAAAATACCCAGGCCGAAGAATCTGACAGGGAAGAAAAACTGAAGGGGCTTAAAGACGAGGTTAAAGCTGCTGAATCAGAATTGGAAAGATTGAAAGAAGCAGAGGCTACATTAATGAACGACATTAATAGGCAAAATGACGACATCCGAAGCATTGCTAATAAGATCCAAGATCATGAAAAGAAGTATAGTGATATCATCTATAATCTTCGTGGTCTTCAACAACAACAAAGCAACAAGATCACAGCATTTGGAGGAAATAAAGTGTTGAGTTTGTTAGAAAAAATTGAGAGATGTCATCGAAGGTTTAAGATGCCTCCCATTGGTCCAATTGGCGCCCATCTGAAGTTGCTTAATGGTGATAAATGGGCGGTTGCTGTTGAATATGCCATTGGGAGATTGCTCAATTCTTTTATAGTGACTGATCACAAGGACTTTCGTCTTCTGAAACAATGTGCGAAGGAAGCAAATTATGGTCATCTTCAAATTATTATTTATAATTTTTCAACCCCAAGGTTGATGATACCAGAGCACATGCTTCCTAATACAAACCATCCATCAACACTTTCCATCTTACAATGCGAGAATCACACTGTGTTTAATGTCCTAGTGGATCAGGGAAATGTTGAGAGACAAGTGCTTGTTAACGACTATAATACTGGGAAAGTGGTTGCATTTGAGGAAAGGATCCGAAATCTGAAGGAGGTCTTTACTGTGGATGGATGTAAAATGTTTTCTCGAGGTCCGGTAGAGACAACTCTTCCTCCAAAGAGGAACCAAGTATATGGTCGTCTAAGTAGTTCTGTTGAAGGTGACATTGAGAAACTTCATAATGATGCATCTAATGAACAAAAAGCAGCAAATGACTATAAAAGGGATAAAAGAGGTGCAGAGGTCAAGCTTGAGGATCTTGACAAGAAGATGAGGTCTATAAAGATATTACGTGTTGATGCTGGAAAAAGTTTTTCTTCGAAGAAGCTATTTTTGGAGGATGCAATGCTTCAACAAGCTGCTGAAAGTAGCCTGCCACCTTTGTCCTCAGTTGATGAGATTGGTGAAGAAATTTCAGAAATAAACAAAAAAATAAAAGAAGAGCAGGTGTTGTTAGAAGGCCTTGAGAAGAGGAGGCTTGAAGCAGAGAGAAAAGCTAGTGATCTTAAAGTAAAAGTTGACGAATTGTGTGAATCAGCGAACCATGAACATGCTTCCCTTGAGAAAGCTGAGACTGAACTTCTAGAGATTGAGAGACAAATAGATTCAGCGAAGGAGACGAAGGTTCACTACGATAATGTCATGAAAGACAAGGTCCTGCATGATATTAAGGAGGCAGGGAAGCACTATCTAGAGCTTACAAAAAGGCGTGAGGAAAATTTTGAAAAGGCTTCCGTAATTTGCTGTCAGAATGAACTTGCTTCATTAGGAGGTTGTGATGGGATTACCCCAGAGGAAATCAGTGCCGAATTAGAAAGTCTTAATCGCACACTTAGACGTGAGAGCCTAAGATACTCTGAATCAATTGATGATCTACGGATGTTATATGAGAAAAAACAACGGAAGATTATAAAAAGGCAGCAAGTTTATAAAGCCCTTTGTCAGAAACTAGATGCTTGCCAGAATGCTTTAGAGTTTCGAAGGAGAAAGTTTCAGACAAATGCAGCCAATCTCAAGCAGCAACTGTCTTGGAAATTTAATGGCCATTTGAGGAAAAAGGGGATCAGTGGACTTATCAAAGTTGATTATGAAAATATGGCCTTATCGGTTGAGGTACAGATGCCCCAAGATACATCAAACAGAGCTGTTCGGGACACAAGGGGGCTTTCAGGTGGGGAGCGCTCCTTTTCAACTTTGTGCTTTGCATTAGCCCTTCATGAAATGACAGAGTCCCCATTTAGAGCAATGGATGAATTTGATGTCTTTATGGATGCAGTAAGCCGAAAAATTAGCATGGACACTCTGATTGATTATGCTGCGGCACAAGGATCCCAGTGGATATTGATCACCCCGCACGATACTAGCTTGGTTAAGGGAGGAGGCAGGGTAAAGAAGATGCAAATGGCAGCTCCCCGTTCTTGA | 3177 | 0.3931 | MKRARTTEDSTFSRVSPSLEAGIIKKLRLENFMCHSNHETVFGNHVNLITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGSSNAVIHVEIQNEGEDAFKPEIYGDVIIVERRISESTSSIILKDCQGRKVFNRKADLLEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISAEITSARSIVEDLGSAIRPIEKELIELQVKIKTMEHIEQISVEVQQLKKKLAWSWVYDVDKKLEDQNVRIQKLKDRVPLCQARIDKQLHLLDKLSESCSKKKAEIESMMSSQVKQMKENLSHSMSLAKKEAFALQQDSKCKASKIQKMVQQLKTLELQVQDIHEQHVKNTQAEESDREEKLKGLKDEVKAAESELERLKEAEATLMNDINRQNDDIRSIANKIQDHEKKYSDIIYNLRGLQQQQSNKITAFGGNKVLSLLEKIERCHRRFKMPPIGPIGAHLKLLNGDKWAVAVEYAIGRLLNSFIVTDHKDFRLLKQCAKEANYGHLQIIIYNFSTPRLMIPEHMLPNTNHPSTLSILQCENHTVFNVLVDQGNVERQVLVNDYNTGKVVAFEERIRNLKEVFTVDGCKMFSRGPVETTLPPKRNQVYGRLSSSVEGDIEKLHNDASNEQKAANDYKRDKRGAEVKLEDLDKKMRSIKILRVDAGKSFSSKKLFLEDAMLQQAAESSLPPLSSVDEIGEEISEINKKIKEEQVLLEGLEKRRLEAERKASDLKVKVDELCESANHEHASLEKAETELLEIERQIDSAKETKVHYDNVMKDKVLHDIKEAGKHYLELTKRREENFEKASVICCQNELASLGGCDGITPEEISAELESLNRTLRRESLRYSESIDDLRMLYEKKQRKIIKRQQVYKALCQKLDACQNALEFRRRKFQTNAANLKQQLSWKFNGHLRKKGISGLIKVDYENMALSVEVQMPQDTSNRAVRDTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISMDTLIDYAAAQGSQWILITPHDTSLVKGGGRVKKMQMAAPRS* | 1059 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr4g1750 | 1058 | Pfam | RecF/RecN/SMC N terminal domain | 24 | 1040 | IPR003395 | - | |
| Tpr4g1750 | 1058 | Coils | Coil | 723 | 757 | - | - | |
| Tpr4g1750 | 1058 | CDD | ABC_SMC6_euk | 24 | 178 | - | - | |
| Tpr4g1750 | 1058 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B | 20 | 1058 | IPR027132 | GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915 | |
| Tpr4g1750 | 1058 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 | 20 | 1058 | - | - | |
| Tpr4g1750 | 1058 | Coils | Coil | 346 | 366 | - | - | |
| Tpr4g1750 | 1058 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 24 | 1048 | IPR027417 | - | |
| Tpr4g1750 | 1058 | CDD | ABC_SMC6_euk | 959 | 1058 | - | - | |
| Tpr4g1750 | 1058 | Gene3D | - | 746 | 1053 | IPR027417 | - | |
| Tpr4g1750 | 1058 | Gene3D | - | 23 | 221 | IPR027417 | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Pathway information