Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1735 ATGGATCTTTCCACTGAGTTTGATGACCTAATTCCCTACCACTTACTAGAGAGTTTAAGAGTCTTTGTCATTGATCATGACACCACTCAACTTCATGCCATTGCAAATATGTGTATTCAATGCAACTATCAAGTTATCACATCCACTTTGGCTTCTTTTGCCCTAAATCTTTTGAGACAAACAAAGGGTCCTTTTTTTGATTTGATATTAATTGATGATCAAATGCCGGATATGGATTCCTACGACTTTTTGCAACATGTTACACAAGAAATCAAAATTCCGGTCATTATGATGGGTGTTGATGACACAGCAAGTGAAAGGATGAATGGGGCTTGTGATTATTGGCTAAAACCTTTGAATCCGAATTATATAAAAAACATGTGGCAACATGTTGCAACAATTCAACATGATCAAACTGAAACAGTCTCGGAGGTGGTCAAAACAGGACAAAAACGAAAGAAAAGAGATGAAGAAAGTGAAACAAAGAAGAATCGTGTATCATGGGTGTCATCATCGGAACTTGAAGAAAAATTTGTAAGAGCTGTGAATCAACTTGGCATTGAAAAGGCAACGCCAAAAAAAATTACCGAAATGATGGATGTTCGGGGTTTGGAAACGTCGCATGTTGCTAGCCACTTGCAAAAATTTCGACTTCGTCGTTTCAATTGTTCAAGTAAAAAGACAAAGCCAAAAAGTGGAAGGGAAAATTCAAATGTTCCTCATGAAAGCATTCAAGTTGTTGAGTCAATGCCAAAACAAGATAAAACATGTGATGGCAATTTTCTAAATGCACAGCAACAACATCCGATTCCGATGTTGTTTGATGATTTTGAAGTTTCCAATATTTTGACTAACAAAACCAACATGATGCTAGATGATTCATCATCATTATATGAACAAGCATGGTATCCATTCGAAGAATTTGGTACATTTGGTCACTATTTTGACTAG 951 0.3628 MDLSTEFDDLIPYHLLESLRVFVIDHDTTQLHAIANMCIQCNYQVITSTLASFALNLLRQTKGPFFDLILIDDQMPDMDSYDFLQHVTQEIKIPVIMMGVDDTASERMNGACDYWLKPLNPNYIKNMWQHVATIQHDQTETVSEVVKTGQKRKKRDEESETKKNRVSWVSSSELEEKFVRAVNQLGIEKATPKKITEMMDVRGLETSHVASHLQKFRLRRFNCSSKKTKPKSGRENSNVPHESIQVVESMPKQDKTCDGNFLNAQQQHPIPMLFDDFEVSNILTNKTNMMLDDSSSLYEQAWYPFEEFGTFGHYFD* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1735 316 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 163 219 IPR006447 GO:0003677
Tpr4g1735 316 SUPERFAMILY Homeodomain-like 162 219 IPR009057 -
Tpr4g1735 316 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 264 IPR045279 GO:0009736
Tpr4g1735 316 MobiDBLite consensus disorder prediction 146 164 - -
Tpr4g1735 316 SUPERFAMILY CheY-like 17 140 IPR011006 -
Tpr4g1735 316 Gene3D - 159 221 - -
Tpr4g1735 316 Gene3D - 14 138 - -
Tpr4g1735 316 SMART REC_2 19 128 IPR001789 GO:0000160
Tpr4g1735 316 CDD REC_typeB_ARR-like 21 132 - -
Tpr4g1735 316 MobiDBLite consensus disorder prediction 145 166 - -
Tpr4g1735 316 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 16 264 - -
Tpr4g1735 316 Pfam Response regulator receiver domain 21 126 IPR001789 GO:0000160
Tpr4g1735 316 ProSiteProfiles Response regulatory domain profile. 20 132 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1735 Tpr-Chr4 17891728 17893479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1735 18 218 Response Regulator Gene Family AT2G25180 38.559 1.44e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr4g1735 Response_reg 6.3e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1735 - K14491 mtr:MTR_6g045327 193.356