Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1693 ATGGCTAAAGATGTTGAGGTTCAAGAACATGGAGAATACTCAGCTAAAGATTACCAAGACCCACCTCCAGCACCATTGATAGATGTTGAGGAATTAACAAAGTGGTCTTTTTATAGAGCTCTTATAGCTGAATTTGTAGCAACACTTCTTTTCCTTTATGTCACTATTTTGACCATCATTGGTTATAGCCACCAGTCTGATCCTAATGCTGGTGGTACTGACTGTGATGGTGTTGGCATTTTGGGTATTGCTTGGGCTTTTGGTGGCATGATTTTCATCCTTGTTTACTGCACCGCCGGTATCTCAGGAGGACACATAAACCCTGCCGTGACATTCGGGCTACTTGTTGGACGAAAAATATCCTTGATAAGGGCAATATTCTACATAGCAGCACAGTCTGCCGGAGCAATCTGCGGTACCGGACTTGCCAAAGGTTTCCAAAAGGCATACTTTGACAGGTATGGAGGTGGTGCCAACTTTATCCATGATGGTTACAACAAAGGTACAGCTTTAGGTGCTGAAATTATTGGTACCTTTGTTCTTGTGTACACTGTCTTCTCTGCCACTGATCCTAAGAGGAATGCTAGAGACTCTCATGTTCCTGTTTTGGCACCACTTCCTATTGGATTTGCTGTTTTCATGGTTCACTTGGCTACTATCCCAATTACCGGTACCGGTATTAACCCGGCAAGAAGTTTCGGATCAGCCGTAATCTACAACGAAGACAAAATTTGGGATGATCAGTGGATATTCTGGGTTGGACCAATTATTGGAGCAACTATAGCTGCAATTTACCATCAATACATTCTAAGAGGATCAGCCATTAAAGCACTTGGATCCTTCAGAAGCAATGCTTAA 858 0.4277 MAKDVEVQEHGEYSAKDYQDPPPAPLIDVEELTKWSFYRALIAEFVATLLFLYVTILTIIGYSHQSDPNAGGTDCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLVGRKISLIRAIFYIAAQSAGAICGTGLAKGFQKAYFDRYGGGANFIHDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGSAVIYNEDKIWDDQWIFWVGPIIGATIAAIYHQYILRGSAIKALGSFRSNA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1693 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 SUPERFAMILY Aquaporin-like 30 270 IPR023271 -
Tpr4g1693 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Tpr4g1693 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Tpr4g1693 285 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1693 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
Tpr4g1693 285 PANTHER AQUAPORIN PIP2-4-RELATED 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1693 Tpr-Chr4 17481213 17483271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1693 1 283 Major Intrinsic Protein MIP AT5G60660 78.092 2.63e-167 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1693 K09872 - gmx:100811119 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1693 4 17481213 17483271 Tpr4g1693 4 17481213 17483271 ECH
Tpr6g0911 6 8043519 8045421 Tpr4g1693 4 17481213 17483271 ECH
Tpr7g4381 7 52581578 52584029 Tpr4g1693 4 17481213 17483271 PCT