Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1667 ATGAAGTTGCAGATCAAAGTTGCTCTTGCTATTGTTATTAGTTTGCTCTGGATTCAACATTCCCTTGGTGATGAAGCATCTGATACATCTGGCCTAAACAAGTGGAAATGTAGATGTTCTTTTTTTGAAGGGAACCAAAGCAACTATCTTGCTAATTGTTCGAAATCATGTGATTGCCATTCAGATTCTGAAGAGGGTGCATCCATATGGACATGCATTTGTGATCCTGATGGATTTCCCCATGTGGCAGAAGATGGTCATAGCTCTAATTGCTTTCATGCCTGCAACTGCACCTGGGGAACTGTCGGCACATCATCAGGTTCAAAGAAACACATCTCCAGCAAGGCTGTTGTAATTATCCTATTGATATGTGTTATATGCACAACCATTGCATTGCTTACCTCAGTTGTATGCTACATCTACCGAAGGGGCAGATGCACTATTCAATCACCAATATTCTCATCAGATAAGGATACGAGTAGTGGTAGTACCACCAATCTAATCAGTTATAGGACAGGAACTTCTTCAGTGCCAGAAACAAAACTTTTTATAAATTCTCCTATTTATCATTTCACAGGATGCTTTCCGAAAGCCTCTTTTTTGTTTGGGAGCCAAAAAGAAACGTTTTATGGAAATATTATTCAATTTTCATTTGCCGAACTGGAAAGTGCCACTGATAACTTTTCAGCTACCAACCTTATTGGATTAGGCGGAAGTAGTTATGTGTACCGTGGTCGGCTGAAAGATGGTAATATTGTGGCTGTTAAGCGACTAAAAGATCATGGAGGGACAGAAGCAGACTCTGCATGTTTCAAGGAGATTGAACTATTAGGTAGACTTCATCATTGTCATTTGGTGCCGTTGCTTGGATACTGCTTAGAATCGAAAGGAAAACATGTTCAGAGGTTACTAGTATTTGAGTACATGACTAATGGGAATTTGAGGGAATGTTTAGACGGAGTTTCTGGAAAATATATGGATTGGACTACTCGTGTTACGATTGCAATAGGAGCAGCAAGGGGCTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGGATTCTTCATAGAGATGTGAAATCAACCAACATTCTTCTGGACAAGAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGAGATCAGATGACCTACCAAGCTGTTCGGGTTCTCCAGCAAGAATGCAGGGAACATTTGGCTATTTTGCACCCGAGTATGCTATTATTGGTAGAGCCTCACTTGAATCAGATGTCTTCAGTTTTGGTGTGGTTCTTCTCGAGCTTATTAGTGGTCGACATCCTATCCATAAAACTTCAGGAAAAGAAGAAAGCCTCGTTATATGGGCTTCTCCTCGTTTACAGGATAGTAGACGAGTAATAACAGAGTTAGTTGATCCACAATTGAAAGGTAATTTCCCAGAAGAAGAGGTGCATATAGTGGCATACCTAGCAAAAGAGTGCTTGCTTATGGATCCCGACACTCGACCAACCATGAGCGAGGTTGTTCAAATTCTTTCAAGTATTTCTCCAGGAAAATCAAGGAGGAGAAGAAACATTCCCACTAGCTTTTTTCAGGAACTGGAGGATGCCGGAAAGCACAGGCAAGTTCCATCGAGTAAATTTCCAACTCATAATTCATCGTCACTAGATATCAATCACAATCCGTGTGTTGTGAACGAAAACAAAGAAGCAGGTCCAGTTTCACCTGAGTATATGGAAAGTTTAATCCTCTTGACTTCAAAATCTGATGGCAGGCATGCATCAGAAGAAGAAATGGTTGACATAATCGAGCCTCGGTTTGAATCATTTTGCATGACAAATGGCACAGTCCCTTGA 1842 0.4077 MKLQIKVALAIVISLLWIQHSLGDEASDTSGLNKWKCRCSFFEGNQSNYLANCSKSCDCHSDSEEGASIWTCICDPDGFPHVAEDGHSSNCFHACNCTWGTVGTSSGSKKHISSKAVVIILLICVICTTIALLTSVVCYIYRRGRCTIQSPIFSSDKDTSSGSTTNLISYRTGTSSVPETKLFINSPIYHFTGCFPKASFLFGSQKETFYGNIIQFSFAELESATDNFSATNLIGLGGSSYVYRGRLKDGNIVAVKRLKDHGGTEADSACFKEIELLGRLHHCHLVPLLGYCLESKGKHVQRLLVFEYMTNGNLRECLDGVSGKYMDWTTRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKNLRSDDLPSCSGSPARMQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELISGRHPIHKTSGKEESLVIWASPRLQDSRRVITELVDPQLKGNFPEEEVHIVAYLAKECLLMDPDTRPTMSEVVQILSSISPGKSRRRRNIPTSFFQELEDAGKHRQVPSSKFPTHNSSSLDINHNPCVVNENKEAGPVSPEYMESLILLTSKSDGRHASEEEMVDIIEPRFESFCMTNGTVP* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1667 613 Gene3D Phosphorylase Kinase; domain 1 202 308 - -
Tpr4g1667 613 PANTHER OS01G0253100 PROTEIN 2 607 IPR045271 GO:0004714|GO:0006468
Tpr4g1667 613 SMART serkin_6 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1667 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Tpr4g1667 613 Gene3D Transferase(Phosphotransferase) domain 1 309 527 - -
Tpr4g1667 613 Pfam Protein kinase domain 231 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1667 613 ProSiteProfiles Protein kinase domain profile. 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1667 613 SUPERFAMILY Protein kinase-like (PK-like) 209 507 IPR011009 -
Tpr4g1667 613 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Tpr4g1667 613 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1667 Tpr-Chr4 17181288 17188500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1667 1 609 Receptor kinase-like Gene Family AT2G28250 50.732 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Tpr4g1667 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1667 - - gmx:100817870 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1667 4 17181288 17188500 Tpr4g1667 4 17181288 17188500 ECH
Tpr7g4400 7 52779539 52784686 Tpr4g1667 4 17181288 17188500 PCT