Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1664 ATGGGAACTAATCTTGTATTCATCCATAACAAAATCATGATTCATCTTATGTTTATTTCATTGATATGCATAACTTCATGCTATTCTCAACAACCTTATGACATTTCCAATTGTTTTTCAAATGAAACACATCCAGGTTCAAGATACACATGCAATATTTCAACACGTGAAACATGCAAAACATTCTTAGTATATAGGGCCAACCAAAATTTCAAAACCATTTCACAAATCTCAAATCTCTTCAACAAAACCACTAATGAGATTCTTCAAATAAACAACCTTACATCTTCATCTCAAATACTTAAACAAGGTAAAGAAGTTCTTATTCCTATCGAATGTACATGTTCTGAACAATTTTACCAAGCCGAATTCAGCTACAAAGTTCTTGAAAACTCAACAACATTTTCAAATATTGCTTGTGAGGTTTTTGAAGGATTAGTGAAACATCTAACACTTTCTGATGAAAACCAATCACAATTACAAGGTAATGAACCAAAAATTGATGATGTTCTTCATGTACCACTTAGATGTTCATGTCCAAAAAAAAATGTCTCTAATCTTAAAAGGGTAATAAAGTACTTTGCTACATACCCTCTTATACAAGGAGATAATTTTGATATATTGATTAAGAAATTTGGTTTCTCACTTGATGATTTCTTAGAAGCTAATCAATTACAAAGTACCTTTTCATCAATTTTTCCTAATACAATTGTTTTAATTCCATTAAGAGATGAAAATGGTTCAATCAAAATATTTGATATTCCAGATTCTCCTTCTCCACCTCCTAATTTTCTTCCAACAAATCCATTTGTCACACATGGATCAACACAACCATCAAATTTATATATTTCTGGACCTATCATAGGTTTTGTATTAATCATCATAACATTGATTGCAAGTGGATTCTACATGAAGAAATTGAGAAAAAGTGATGTTGTTATTGATTCCTTTAATCCAAAAATTACTTCAAATTCAAACTCTTTGTATTCACCAATGAGAGCTTCTACAACTTCATGTTTATCTCCTGATTTTCTTGTTGGAATAAAGTATTGTTTGCTTAATTACCATATTGAAGAGATAGAGAAAGCAACAAATTTTTTTAGTGATATGAACAAGATTGGTGATTTTGTTTATAAAGGGTTAATCAATGATATTGAAGTGATGGTTAAGAGGTTAAGATTTGAAGATACTAGTGAGGTAATTGATTTACATTCAAGAATTAATCACATTAATATTGTGAATTTAATTGGTGTTTGTTATGGTGAAGGTGATGTAATTTCTTGGTCTTATTTAGTTTTTGAGTTACCTAAAAATGGTTGTTTAAGGGATTGTTTAATTAATTTGGATCCATGCAATAGTTTAAGTTGGTTAAGAAGGACACAAATAGCATTTGACATAGCAACATGTCTTTACTATTTACATTATTGTTCTTTTCCTTCTTATGCTCATATGAATGTGAATAGTAGAAATATATTTGTGACTGAAAATTGGAGAGGTAAATTAGCAGATGTTGGGGGTGTATCTAATAATCTTTTACATGGAATAGTTTCACAAAAGGTTGATATTTTTGCATTTGGTGTTGTTTTGCTTGAGTTGATATCTGGAAGAGAAAATTTGGATGGAAAATTGATGAAAGATTGTGTTGGTTTTTTGTTGGGGGAAGGTAGTGAAGGTGGTGGATGTTTTGAAGGGTTGAGGAGTTTTGTGGATCCAAATTTGAAGGAGTATTCTCTTCCTGAGGCTCTTTGTTTGTGTTTTTTAGCTAAGGATTGTGTGAAAGATGATCCTTTGCTTAGGCCAAGTATGGATGATATCATGAAGGTTCTTGCAAAAATGGTTTAG 1842 0.3073 MGTNLVFIHNKIMIHLMFISLICITSCYSQQPYDISNCFSNETHPGSRYTCNISTRETCKTFLVYRANQNFKTISQISNLFNKTTNEILQINNLTSSSQILKQGKEVLIPIECTCSEQFYQAEFSYKVLENSTTFSNIACEVFEGLVKHLTLSDENQSQLQGNEPKIDDVLHVPLRCSCPKKNVSNLKRVIKYFATYPLIQGDNFDILIKKFGFSLDDFLEANQLQSTFSSIFPNTIVLIPLRDENGSIKIFDIPDSPSPPPNFLPTNPFVTHGSTQPSNLYISGPIIGFVLIIITLIASGFYMKKLRKSDVVIDSFNPKITSNSNSLYSPMRASTTSCLSPDFLVGIKYCLLNYHIEEIEKATNFFSDMNKIGDFVYKGLINDIEVMVKRLRFEDTSEVIDLHSRINHINIVNLIGVCYGEGDVISWSYLVFELPKNGCLRDCLINLDPCNSLSWLRRTQIAFDIATCLYYLHYCSFPSYAHMNVNSRNIFVTENWRGKLADVGGVSNNLLHGIVSQKVDIFAFGVVLLELISGRENLDGKLMKDCVGFLLGEGSEGGGCFEGLRSFVDPNLKEYSLPEALCLCFLAKDCVKDDPLLRPSMDDIMKVLAKMV* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1664 613 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 612 - -
Tpr4g1664 613 Gene3D Transferase(Phosphotransferase) domain 1 437 509 - -
Tpr4g1664 613 Pfam Protein tyrosine and serine/threonine kinase 384 505 IPR001245 GO:0004672|GO:0006468
Tpr4g1664 613 ProSiteProfiles LysM domain profile. 195 240 IPR018392 -
Tpr4g1664 613 Pfam LysM domain 202 241 IPR018392 -
Tpr4g1664 613 Gene3D Transferase(Phosphotransferase) domain 1 510 613 - -
Tpr4g1664 613 ProSiteProfiles Protein kinase domain profile. 292 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1664 613 Gene3D Phosphorylase Kinase; domain 1 349 434 - -
Tpr4g1664 613 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 13 612 - -
Tpr4g1664 613 SUPERFAMILY Protein kinase-like (PK-like) 350 609 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1664 Tpr-Chr4 17143398 17145437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1664 15 613 Receptor kinase-like Gene Family AT2G23770 29.141 2.90e-64 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g1664 PK_Tyr_Ser-Thr 1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1664 - - lja:Lj1g3v4047410.1 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1664 4 17143398 17145437 Tpr4g1664 4 17143398 17145437 ECH