Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1659 ATGAACAAAAGAGATAAAATTAAGAAACATGATTTTGTTGTTACAATAATTGTTGTATTGTTCATTTGCACTCTTGGACCACAACTAGTTTCTTGTCAGAAAAATACAGGTGATGGTGGTTCAAGTGGTACCGGTCTTGAGGATATAGTCGCGAAAGAAATGTATCGCGGCTTATCCAGTTATACAAATGTTTTCAAAGCTACAATTAAAAAAGAGTTGGGTTATTGCATAGTTGATGTGGATGCTGATTGGGATGGTGCCTTTAATTTCACCAAAGATCTCACATTTTTGTCCATGTGTGCCCAAGAAATGAAAGGAGATATTTCACAAAGGATGTGCACATCAGGAGAAATAGAAGCCTATGCCAGAAGTTTTGCTGCAGGAGACAAGTCTGCAGGCTCTGGAAGAACCAAAGCAAACTTTTTGAAGCCAAACAAAAACTGTAATTTGAGTTCTTGGGTTAATGGATGTGAACCTGGTTGGGGCTGTAAAGCTAATGATAAAGTTGATGTTAATAATCAAAAGAAGGAAATACCTGTTAGATCTGTTGATTGCAAACCTTGTTGTGAAGGTTTCTTTTGTCCTCGCGGCATCACCTGCATGATTCCTTGTCCTTTGGGATCTTATTGTCCGCGTGGGGAACTAAATAAAACTAGTGGAATATGTGCACCATATCGTTATCAGTTACCTCCTGGAAAAGCTAACCATAGCTGTGGAGGAGCAGATATTTGGGCTGACATTACCAGTAGTAGCGAGGTATTCTGTTCAGCAGGATCATATTGTCCATCTACAATCGTAAAAAATCCTTGCAGTAGAGGGTATTACTGCAGAACAGGTTCTACAGCTCAAGAGAGATGTTTCAAGCTAGCAAGTTGTGAGCCGAAATCTGCAAATCAAAATATTACTGCATATGGTCTCCTGGTTTTTGCCGGCTTGTGTTTTATGCTGATTATCATATACAACTGTTCTGATCAAGTTCTCGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGAGCTGCTGCAAGTGTAAGAGAAACACAAGCGCGCGAAAAATGGAAATCTGCAAAAGACATTGCTAAGAAGCATGCTACAGGACTACAATCACAATTATCGCGTACATTTTCGCGCAAAAAAACAAATAAAATGCCAGATTTCAAAGGTGCGTTACCACCTATGGGAGCTGGGGCAAAAGCAAAGAAAAAGGATAAAAACGACCTCTCAAAAATAATAAATGATATTGAGCAAGATCCTGATAGTCAAGAAGGGTTCAATGTGCAAATCGGAGATAAAAATGTGAAAAAACAAGCACCAAGGGGTAAGGCTTTGCATACTCAGAGTCAAATTTTCAAGTATGCATATGGTCAGATTGAAAAAGAAAAGGCAATGCAGGAACAAAATAAGAACTTAACATTTTCCGGAGTGATTTCAATGGCTAGTGACATTGATATAAGGAAAAGGCCTACAATTGAGGTTGCTTTTAAAGACTTAACACTCACTTTGAAAGGGAAAAACAAACATCTATTGAGATGTGTGACTGGTAAGTTACATCCCGGTCGAGTTTCTGCTGTCATGGGTCCGTCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAGCTGGATGCCACACAACTGGTCAAGTTCTTGTAAATGGTCAGGAATCTTCTATTCGATCATTCAAGAGGATCATTGGCTTTGTTCCACAAGATGATATCGTCCATGGCAATTTGACAGTGGAGGAGAATCTGTGGTTTAGTGCCAGATGCAGACTCTCGGCCGATCTACCAAAAGAAGAGAAAGTGTTAGTGGTTGAAAGAGTCATTGAATCTTTGGGTCTTCAGGCAATAAGGGATTCTTTGGTTGGGACAGTGGAGCAACGAGGAATATCTGGCGGTCAAAGGAAGAGAGTAAACGTTGGACTAGAAATGGTTATGGAACCTTCCCTTCTAATTTTGGATGAACCTACATCTGGTTTGGACAGTTCATCTTCTCAATTACTGCTTAGAGCACTTAGACGCGAGGCTCTTGAAGGCGTAAACATATGTATGGTCCTTCACCAACCGAGCTACACATTGTTCAAGATGTTTGATGATTTTATACTGCTTGCTAAAGGAGGCCTTACAGTGTATCATGGACCTGTTAACAAAGTGGAAGAGTACTTCTCTGGGATGGGGATTGTAGTCCCTGACCGCGTAAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATATTAAAACCAAGTGCAAGCTCAGGAGTGACGCATAAACAACTACCAGTTAGATGGATGCTTCATAATGGATATCCTGTGCCTATGGATATGCTGCAACTTATAGAAGGAATGTCAACTCCAAGTGGTACCATTCCAACACAAGGAGGACGTAACCCGAATGCAAAGCTTACTGCCGCGCCTTCTTTTGCCGGAGAACTTTGGCAGGATGTGAAGTGCAACGTTGAGATGAAGAGAGACAACCTTCAACTCAATTTCTTAGCTTCAAATGATTTGTCCAATAGGAATACACCCGGATCTTTCCAACAATACAAATACTTTCTTGGAAGAGTTGGTAAGCAGCGGTTGCGAGAAGCTAGAACACAAGCTGTAGATTTTCTGATTCTGTTGCTAGCTGGTGTTTGCTTAGGAACACTTGCCAAAGTGAGCGATGAATCATTTGGAGCAACTGGTTATACATACACCGTAATTGCAGTATCACTCCTTTCCAAGATTGCAGCTTTGAGATCGTTCTCATTAGATAAGTTGCATTACTGGAGAGAAAGCGCTTCAGGGATGAGTAGCCTTGCTTACTTTCTCTCAAAAGATACAGTTGACCATTTCAGTACACTTATCAAGCCTCTAGTTTATCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAACTACTTTGTTCTACTATGTTTGGTGTATTGTGTCACCGGCATTGCTTATGTGTTGGCAATCTTCCTTGAACCAGGTCCAGCCCAGCTGTGGTCGGTGTTACTACCGGTAGTTTTGACTCTCCTAGCAACTTATGAAAATGAAGAGGATAGCACTTATGTTGCTTTCCTATCCGATTTGTGCTACACCAAATGGGCTCTTGAAGCATTTGTTATATCAAATGCTAAAAGATATTCTGGTGTTTGGCTAATAAGCCGATGTGGTGCACTCAACTCATACGGCTATGATCTCAAACATTGGTACCAATGTTTAGGACTCCTTGTTGTGACAGGAATAATTAGCCGCATGCTTGCATTTTTTTGTATGATAACCTTCCAGAAGAAATAG 3312 0.4052 MNKRDKIKKHDFVVTIIVVLFICTLGPQLVSCQKNTGDGGSSGTGLEDIVAKEMYRGLSSYTNVFKATIKKELGYCIVDVDADWDGAFNFTKDLTFLSMCAQEMKGDISQRMCTSGEIEAYARSFAAGDKSAGSGRTKANFLKPNKNCNLSSWVNGCEPGWGCKANDKVDVNNQKKEIPVRSVDCKPCCEGFFCPRGITCMIPCPLGSYCPRGELNKTSGICAPYRYQLPPGKANHSCGGADIWADITSSSEVFCSAGSYCPSTIVKNPCSRGYYCRTGSTAQERCFKLASCEPKSANQNITAYGLLVFAGLCFMLIIIYNCSDQVLATRERRQAKSRERAAASVRETQAREKWKSAKDIAKKHATGLQSQLSRTFSRKKTNKMPDFKGALPPMGAGAKAKKKDKNDLSKIINDIEQDPDSQEGFNVQIGDKNVKKQAPRGKALHTQSQIFKYAYGQIEKEKAMQEQNKNLTFSGVISMASDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKAAGCHTTGQVLVNGQESSIRSFKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSGMGIVVPDRVNPPDYYIDILEGILKPSASSGVTHKQLPVRWMLHNGYPVPMDMLQLIEGMSTPSGTIPTQGGRNPNAKLTAAPSFAGELWQDVKCNVEMKRDNLQLNFLASNDLSNRNTPGSFQQYKYFLGRVGKQRLREARTQAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTLIKPLVYLSMFYFFNNPRSSFTDNYFVLLCLVYCVTGIAYVLAIFLEPGPAQLWSVLLPVVLTLLATYENEEDSTYVAFLSDLCYTKWALEAFVISNAKRYSGVWLISRCGALNSYGYDLKHWYQCLGLLVVTGIISRMLAFFCMITFQKK* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1659 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 730 IPR027417 -
Tpr4g1659 1103 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 48 1099 - -
Tpr4g1659 1103 SMART AAA_5 519 720 IPR003593 -
Tpr4g1659 1103 Pfam ABC-2 type transporter 691 1103 IPR043926 GO:0140359
Tpr4g1659 1103 Gene3D - 483 729 IPR027417 -
Tpr4g1659 1103 CDD ABCG_EPDR 491 717 - -
Tpr4g1659 1103 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 48 1099 - -
Tpr4g1659 1103 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 734 IPR003439 GO:0005524
Tpr4g1659 1103 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524
Tpr4g1659 1103 Pfam ABC transporter 513 662 IPR003439 GO:0005524
Tpr4g1659 1103 Coils Coil 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1659 Tpr-Chr4 17079492 17085698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1659 520 715 Calmodulin-binding Proteins AT2G36910 27.907 1.49e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1659 - - gmx:100794093 1839.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1659 4 17079492 17085698 Tpr4g1659 4 17079492 17085698 ECH