Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1656 ATGGCTGATATTGAGGGATCACCAGGAAGCTCCATGCATGGAGTTACTGGAAGAGAACAAACCTTCATATCATCAGTTGCTTCTCCTATGGTTCCAACTGACACCACTGCCAAATTTGCATTACCAGTTGATTCTGAACACAAATCCAAAGTTTTCAAACTCTTTTCACTAGCCAATCCTCACATGAGAACTTTCCATTTATCATGGATATCTTTTTTCACCTGTTTCGTCTCCACTTTTGCTGCTGCGCCGCTTGTCCCTATCATCCGCGACAACCTTAACCTCACGAAAGCGGATGTAGGTAACGCTGGTGTGGCTTCGGTTTCAGGTAGTATTTTCTCAAGGCTAACAATGGGTGCAGTTTGTGACCTATTAGGTCCACGTTATGGTTGTGCATTTCTTATTATGCTAACTGCACCGACAGTGTTTTGCATGTCATTTGTTGAAGATGCAGCTGGTTATATAGCAGTTAGATTTATGATTGGTTTTTCATTGGCAACATTTGTTTCATGTCAATATTGGATGAGTACTATGTTTAATAGTAAGATTATTGGACTTGTTAATGGTACTGCAGCTGGTTGGGGTAATATGGGTGGTGGTGCCACTCAACTTATTATGCCTTTGGTTTATGAGTTGATTAGAAGATGTGGTGCTACTCCTTTCACTGCTTGGAGAATTGCCTTTTTTATCCCTGGTTGGTTGCATGTTATCATGGGTATTTTGGTCTTAACATTAGGCCAAGATTTACCTGATGGTAACCTTGGTGCTTTACAGAAGAAGGGTAATGTTGCTAAAGACAAATTTACAAAGGTGTTATGGTATGCTATAACAAATTACAGGACATGGGTTTTTGCCCTGCTTTATGGTTACTCTATGGGAGTTGAATTGACCACTGATAATGTCATTGCTGAGTATTTCTATGACAGGTTTGACCTAAAGCTACACACAGCTGGAATCATTGCAGCTTCATTCGGAATGGCAAACCTAGTGGCTCGTCCATTTGGCGGATATGCATCAGATTTGGCAGCCAGGTTATTTGGCATGAGAGGAAGGTTATGGACACTATGGATTCTCCAAACTCTTGGTGGAGTTTTCTGCATATGGTTAGGACGTGCAAATACACTTCCAATTGCAGTACTATCCATGATTCTCTTCTCAGTTGGAGCACAAGCAGCATGTGGTGCAACATTTGGAATCATTCCATTCATATCAAGAAGATCTTTGGGGATTATATCAGGTTTAACAGGTGCAGGTGGTAACTTTGGTTCTGGATTAACACAGTTAGTGTTTTTCTCAAGCTCAAAATTCTCAACATCAACTGGTCTTTCATTAATGGGTGTAATGATTGTAGCTTGCACATTACCTGTGACTCTTGTACATTTTCCACAATGGGGTAGCATGTTCTTTCCACCTTCAAAAGAGATCAGTGAAGAACATTATTACACTTCTGAATGGAATGAAGATGAGGTACAAAAAGGGTTGCATCAATCAAGTCTTAAGTTTGCTGAGAATAGTAAATCTGAGAGAGGTAAACGTGTGGCTTCTGCAGCAACTCCACCAAATACAACTCCTACCCATTAG 1581 0.4061 MADIEGSPGSSMHGVTGREQTFISSVASPMVPTDTTAKFALPVDSEHKSKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADVGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVEDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRCGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGNVAKDKFTKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFDLKLHTAGIIAASFGMANLVARPFGGYASDLAARLFGMRGRLWTLWILQTLGGVFCIWLGRANTLPIAVLSMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSSSKFSTSTGLSLMGVMIVACTLPVTLVHFPQWGSMFFPPSKEISEEHYYTSEWNEDEVQKGLHQSSLKFAENSKSERGKRVASAATPPNTTPTH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1656 526 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 523 - -
Tpr4g1656 526 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Tpr4g1656 526 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Tpr4g1656 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Tpr4g1656 526 MobiDBLite consensus disorder prediction 496 526 - -
Tpr4g1656 526 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Tpr4g1656 526 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 523 IPR044772 GO:0015112
Tpr4g1656 526 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Tpr4g1656 526 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1656 Tpr-Chr4 16999154 17001569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1656 1 526 Inorganic Solute Cotransporters AT1G08090 79.773 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1656 K02575 - gmx:100807710 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1656 4 16999154 17001569 Tpr4g1656 4 16999154 17001569 ECH