Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1647 ATGGATGTAACAATTGATTATCTATATGCAGTAGTTGCAGGACTTATATGCATACTCCTAATTTCATACTCTAAATTCTTTAAGGTTAAATCACAAACACAACCCAAGCTTCCACCTTTAGCTGCTGGTGGGTGGCCGTTAATCGGCCACCTACATCTCTTAGGCAGTTCAAATCAACCTCCATACATAACCTTAGGAAACTTATCCGACAAATATGGACCGATTTTTGCCCTACGAATCGGGGTACACAAAGCCGTTATAGTAAGCACTTGGGAGTTAGCAAAAGAGATTTTTACAACTCACGATGTAATAATCTCTTCTCGTCCCAAATTCACTGCTTTCAAAATATTAGGACATAACTATGCTAATTTCGGGTTCTCTCCATATGGAGAGTATTGGCAAAGGATGCGTAAAATTACAGCCTCCGAGCTCCTATCAACTCGGAGATTCGAATCTCTTCGTGATATTAGACATACAGAAGTGAAGAAATCATTGACAGAGCTTTATGAGTTAGGTGATGAGTTCAAAGTTGAGATGAAAAAGTTTTTAGGAGATATGAATTTGAATGTGATTATGAGGATGATTGCTGGGAAGAGATATTCGGGTGATGAGAGAGAGGTGATAAAAATGAGATGGGGTTTTAGAGAGTTTTTTAGGTTGAGTGGTTTGTTTGTGGTTGGTGATGCAATTCCATTTCTTGGATGGCTTGATCTTGGAGGATATGTGAAGGAGATGAAGAAAGCTGCTATTGAAATGGATAGTGTTGTTTGTGTTTGGTTGGAAGAACATCGTAGGAGAAATGATTTGGGGAAGACTAAGATAGAGCAAGATTTCATTGATGTCTTGTTGAATGTTCTTGATGGTGTTGATCTTGATGGTTATGATGTTGACACTGTCATTAAAGCAACTTGCTTGACATTAATTGCCGGAGCAACAGACACGACAACGGTAACTATAACTTGGGCACTATCTTTATTGTTGAACAACCGCCACACTTTGAAGAAAGTTCAAGATGAATTGGACGAAAAAGTTGGGAAAGAAAGGCTAGTGAATGAATCAGATATAAACAACTTAGTTTACCTTCAAGCCGTGGTGAAAGAGACATTGCGATTATATCCCGCTGGACCACTCTCAGGTGCACGTCAATTCACTGAAGATTGTACTGTGGGTGGGTACCATATCCAAGCCGGTACTCGATTAATTTTAAACCTCTGGAAAATGCATAGAGATCCACGTGTATGGTTAGAACCTCTCGAGTTTCAACCCGAGAGGTTCTTAAATACTCATAAGGATGTCGATGTCAAAGGAAATCATTACGAGCTTCTTCCCTTTGGAGGTGGAAGAAGGTCTTGTCCTGGCATAACATTTGGTGTTCAAATGACAAATTTGGCATTAGCTTCTTTCTTGCAAGCATTTGAAGTCACAACTCCATCAAATGCTCATGTTGATATGAGTGCAACATTTGGACTTACAAACATCAAAACCACTCCACTTGATATTATAGCCAAACCTCGTTTACCATACCACCTTTTTGTTAATGAAAATTAG 1548 0.3915 MDVTIDYLYAVVAGLICILLISYSKFFKVKSQTQPKLPPLAAGGWPLIGHLHLLGSSNQPPYITLGNLSDKYGPIFALRIGVHKAVIVSTWELAKEIFTTHDVIISSRPKFTAFKILGHNYANFGFSPYGEYWQRMRKITASELLSTRRFESLRDIRHTEVKKSLTELYELGDEFKVEMKKFLGDMNLNVIMRMIAGKRYSGDEREVIKMRWGFREFFRLSGLFVVGDAIPFLGWLDLGGYVKEMKKAAIEMDSVVCVWLEEHRRRNDLGKTKIEQDFIDVLLNVLDGVDLDGYDVDTVIKATCLTLIAGATDTTTVTITWALSLLLNNRHTLKKVQDELDEKVGKERLVNESDINNLVYLQAVVKETLRLYPAGPLSGARQFTEDCTVGGYHIQAGTRLILNLWKMHRDPRVWLEPLEFQPERFLNTHKDVDVKGNHYELLPFGGGRRSCPGITFGVQMTNLALASFLQAFEVTTPSNAHVDMSATFGLTNIKTTPLDIIAKPRLPYHLFVNEN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1647 515 Gene3D Cytochrome P450 23 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Tpr4g1647 515 PANTHER CYTOCHROME P450 82C3-RELATED 11 510 - -
Tpr4g1647 515 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 Pfam Cytochrome P450 42 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1647 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 510 - -
Tpr4g1647 515 SUPERFAMILY Cytochrome P450 44 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1647 Tpr-Chr4 16876228 16879314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1647 15 512 Cytochrome P450 AT4G31940 46.705 3.22e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1647 - - gmx:100810391 729.169