Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1644 ATGGAAAACTATGATGAGTCTGCTGATGTTGATGTTGATGTTGATTCCATTCATTCAAGTGAACGTGATTCATGGGACGAGGAGTTGGACGATGAAGAAAGTTATTCGATATCTAATATGAATCAAAAATCAGTGGATGGCGATCATTCAGCTGATAATGGCAATGATGATGGAGATGCAGTTGGATGCAATAGCCAGATAAGGTTTGATACCATAACTGCTGAAGAAATTCGTTCTATGGAATTTGCCACTCTTAATGAAGCTTATGACTTTTATTACCGTTATGGTAAGTATAATGGTTTTGCTGTTAGGAAAGGTGATAGTAGGGTAAGAGGTAGTGAAGGTAATAAAGTAATAAAAATGAAGCAGTTTGTATGCAACAAACACGGTGTAAGAGAGAAGAGACACTTAGTTAGGGTAGATAGGAAATTAGAACATAGACGGTTGACCCGCACTAAATGTGGAGCCAGGCTTCGTGTGAAATACAAAGCTGAAAAAGATAGATATGTAGTTTCAGCTTTTGAAGAGACTCATAACCATGAATTAACCCCAGCTAGGTTTGTGCACTTACACCCCGTATATCGTAAAATTTCTGAAGTAGATAAGGCTCAGGTGGATAGTCTTCAGAAACGTGGCATTAGAACATGTCATATAATGGGGTACATGGTTGCACAGAAGGGTGGATATGCTGATGTTGGTTTTACAAAGAAAGATTTGTACAACTATTTTGATAAAAAAATGCGTGCTGTTATTAAAGATGGTGATGTTGCCGCAGCTTTAAACTACCTGAATATGAAGTCGTCTAGTGATCCCATGCTTTATGCTGAGTATGCTGTAGACAACGTTAATGGAAGAATGAAGACTCTTTTTTGGGCTGATGGGATTAGTAGGACCGACTATTTTTGTTTTGGTGATGTGCTTGCATTTGACACGACTTACAGGAAGAACAAGTACAACTATCCGTTGGTTGTATTTTCAGGGTGTAACCACCACTCTCAAACAGTAATTTTTGGTGCTGCATTGGTGTCAGATGAAACGACGGAGACGTATAAGTGGGTGTTGAGGTGTTTCCTAGAATGCATGGAAGGTAAACAACCAAAAGCGGTGGTAACAGATGGGGATGGGGCAATGAGAGAGGCCATAAAACAGATATTTCCCGATGCTAACCATAGGTTATGTGCTTGGCATTTGAATAAGAATGCAAGTGAGAATGTGAAGAACGGAAATAATTTTTTGGACGGTTTTTCAAAGGCCATGTACTCAAATTTTACAATAGATGAATTTGAAGAGTATTGGTCACAAATGATTAAAGAAAATGGAGTGCAAGGACATCCTTGGGTAGTCAAAACGTACGAGAATAGGTCACTGTGGGCTACTGCATATCTACGAGATAATTTTTTTGGACGTATAAGAACTACGTCGCAGTGCGAAGCTGTTAATGCAATAATTAAGAGTTATGTCAGGAAGCAAGGATGCATTTTTGAATTTATGAACAACTTTGATCAGGCTTTGAGAGATTATAGAAATAATGAGTTGGTTGCTGATTTTAAATCATCGTCTACAGATCCTGTGTTGTCGACGCAACTGCCTGTGATTGAGAGTCATGCTGGTAAAATATATACGGCGGAGCTTTTCAAAGAAGTTAGACATGAAATATTGAAAGCCGGTGAATTGATAGTTAGGGAGAAAAGCGAAGTCGGGGGTAGGAAGGCTTATAGATTGACAAAATATTGTAAGGATGGTTATGAAAGAAGTGTTGTTTATGATGGTTCGACATTTGAGTGTTCATGTAAGAGGTTTGAGTCCCGTGGCATTCCGTGTTCTCATATTTTTTACGTAATGAAGGAAGAACACGTTGATCGTATCCCAAGCAATTTGGTTTTGACGCGATGGACCAAGGATGCAAAAATTCAGTTTTTGAACACCAGCAATTTTAATGATAATGTTGATTTGAATACGATTGCCGAAGCTCGTTTTGGTTCATATTGTACTGTTTTAACAGAGTTCTGCAAAGAAGCTTCAAAAAAAGATGGTGTTTATGCACAAATAATGGAAGACCTGATGCAGCTGAAAAAAAAGTATTGCAGTAAAGATGATGATGCAATCGGTACACAAAAGTCAGCAGTAGGCGATCCAGTTATGGTTAAGTGTAAAGGTGCTCCAAAGAAAAAGAATAATGTCGCAAAATCTGGCAGGCGCCGTTCAAATGGCAAAAATACAACTCCTAATTCGAAGAGATGTTCGGGTAAACAACAAACGACAGAACAAGTGGCAGAACCGAATGTCGATTTGTACTCGGTGTCGATTTCTGATTCTGTAAGCCAAATTGCTGAGAAAAGGAAAAGAAAAGAAGCTTGCAATGTTCAAAGAAGTGTGCAAAACAAAACTTTGTATCCGCCGAGATACCGCGCTGCTACCGTTACGACACCTGAACATATGGAATTACAGAGCACAAGCAGAATTATGAATCAACAACTGTATCCTATGATGCCTATCGTACATCCGATGATTCAACCGATGCCCCTACAACCCATATACCCAATGTATGGACTGCAACCTGGAATGCAACAAGGAATGCAACATGGAACGAATGTTGGTCAAAGTTCATGCTATGGTCTGCTACAACATGTTATGAAATCTGCTAAGAATGATTGA 2655 0.3902 MENYDESADVDVDVDSIHSSERDSWDEELDDEESYSISNMNQKSVDGDHSADNGNDDGDAVGCNSQIRFDTITAEEIRSMEFATLNEAYDFYYRYGKYNGFAVRKGDSRVRGSEGNKVIKMKQFVCNKHGVREKRHLVRVDRKLEHRRLTRTKCGARLRVKYKAEKDRYVVSAFEETHNHELTPARFVHLHPVYRKISEVDKAQVDSLQKRGIRTCHIMGYMVAQKGGYADVGFTKKDLYNYFDKKMRAVIKDGDVAAALNYLNMKSSSDPMLYAEYAVDNVNGRMKTLFWADGISRTDYFCFGDVLAFDTTYRKNKYNYPLVVFSGCNHHSQTVIFGAALVSDETTETYKWVLRCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDANHRLCAWHLNKNASENVKNGNNFLDGFSKAMYSNFTIDEFEEYWSQMIKENGVQGHPWVVKTYENRSLWATAYLRDNFFGRIRTTSQCEAVNAIIKSYVRKQGCIFEFMNNFDQALRDYRNNELVADFKSSSTDPVLSTQLPVIESHAGKIYTAELFKEVRHEILKAGELIVREKSEVGGRKAYRLTKYCKDGYERSVVYDGSTFECSCKRFESRGIPCSHIFYVMKEEHVDRIPSNLVLTRWTKDAKIQFLNTSNFNDNVDLNTIAEARFGSYCTVLTEFCKEASKKDGVYAQIMEDLMQLKKKYCSKDDDAIGTQKSAVGDPVMVKCKGAPKKKNNVAKSGRRRSNGKNTTPNSKRCSGKQQTTEQVAEPNVDLYSVSISDSVSQIAEKRKRKEACNVQRSVQNKTLYPPRYRAATVTTPEHMELQSTSRIMNQQLYPMMPIVHPMIQPMPLQPIYPMYGLQPGMQQGMQHGTNVGQSSCYGLLQHVMKSAKND* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1644 884 Pfam MULE transposase domain 306 400 IPR018289 -
Tpr4g1644 884 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 64 776 - -
Tpr4g1644 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 776 IPR031052 GO:0006355
Tpr4g1644 884 MobiDBLite consensus disorder prediction 719 756 - -
Tpr4g1644 884 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Tpr4g1644 884 MobiDBLite consensus disorder prediction 1 48 - -
Tpr4g1644 884 MobiDBLite consensus disorder prediction 732 756 - -
Tpr4g1644 884 Pfam FAR1 DNA-binding domain 90 183 IPR004330 -
Tpr4g1644 884 SMART 26again6 593 620 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1644 Tpr-Chr4 16839021 16842085 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g1644 MULE 3.8e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1644 - - ccaj:109792835 846.654