Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1621 ATGGAATTAATGTTGGTAACACCACCATGGCTGGAACAATTATTGTCAACAACATTTTTCTCTTCTTGCAAAGCTCACATCAAGGCACCAAGAAACGAATGCAACATGTATTGCCTCAATTGTAGAGAATCATTCTGTTATTATTGTAGACAAGCTTGGCATAATGATCATCAAGTAATTCAAATAAGGAGATCGTCTTATCATGATGTGGTGAGGGTAGCTGAGATTGAGAAGATATTGGACATTAGTGGAGTTCAAACATATGTGATTAACAGTGCTAGAGTGATTTTTCTTAATGAGAGGCCACAAAATCAGATTAAGACAAGTAATGTTGCTATTAGTGGGAGTAAAACCAATTCACATTTGTGTGAAATATGCACAAGATATCTATTGGACCCTTTTCGTTTCTGTTCTTTGGGTTGCAAGCTTGTAGAAATAAAGAAAAATGGGAATGCAAGCTTTGTCTTAAACGCAAAGAAAGACGAAGAAATAGGGAAAATGCATCAAGGAAGATTGCTATCAAAAGAAGAAGACGAAGAAATATTATTATCAATGCGTGAAGGAATCCAAAAACAAGTTTACAAAACCACGTTTTCTCCTTATTCATCTCAACAAGCTTGTTCAAATTCAAGGAGAAGAAAAGGAATACCTCATAGGGCACCTTTAGGTCCTTAA 675 0.3556 MELMLVTPPWLEQLLSTTFFSSCKAHIKAPRNECNMYCLNCRESFCYYCRQAWHNDHQVIQIRRSSYHDVVRVAEIEKILDISGVQTYVINSARVIFLNERPQNQIKTSNVAISGSKTNSHLCEICTRYLLDPFRFCSLGCKLVEIKKNGNASFVLNAKKDEEIGKMHQGRLLSKEEDEEILLSMREGIQKQVYKTTFSPYSSQQACSNSRRRKGIPHRAPLGP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1621 224 SUPERFAMILY RING/U-box 22 59 - -
Tpr4g1621 224 Pfam PLATZ transcription factor 63 143 IPR006734 -
Tpr4g1621 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 222 - -
Tpr4g1621 224 ProSiteProfiles Zinc finger B-box type profile. 23 62 IPR000315 GO:0008270
Tpr4g1621 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1621 Tpr-Chr4 16423412 16425999 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr4g1621 PLATZ 6.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1621 - - aprc:113859745 357.451