Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1615 ATGGAGAGAAAAGGGATCAACAATAATGATTACAGTTCAGAAGACGAAGGAACTCAACACTATAGACGTGGTGGTTACCATGCGGTTAAAATTGGCGATACTTTCAACAATGCTCGCTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTTGCTTGGGATACTCTCAAATCGCATTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAGCATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGGCAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGCATGCATGTGTGTATGGTTTTTGAATTCCTTGGGGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTTTCCATGGTTAAAGAAATATGTTTTCATATTTTAGTGGGCTTGGATTATTTGCACCGCGAGCTTTCTGTCATACACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTTTCACTGATAGATCCGTGTAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGATAAGGCTTTGGCTAATAATGGTACTATCCAAAACAGTAAAATTGGGAATGGAGATCCGACAAAGAACCAGAAGAAGAAAATGCAGGTAAACACTAAGAGGGTGGCTCAAGGCTGTATTGAGAAGGAAAGTCCAGAGGAAGCTAGGGAGGACTTTAAAGAACCCGAGCAGGAAACTTGTAAAAATCATGTGAAATCAAGAGTAGAATCTTCTGAAAACAAACCCAATAGTTCTTTCAGTGAGGGTGAATCAACACAAACTTTTGAAAAGGATGCTGCACAAGGAAATCATGGAAATAGGAAAGGTAGCCGTTCCATGAGAAAGAAACTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAGTGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCTAAATACTCTACTCCAGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACAGGAGATGTTCTTTTTGATCCTCACAGCGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGATTGCACTTGGTGGCCGCTATTCCCGAGAATTTTTTAATCGACACGGTGAATTGAGGCACATCCGCGACTTGCGGTTCTGGCCACATCATAAGATTCTGACGGAAAAGTATAATTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCGTCCAATACTTGATTTTGACCCTGAAAAGAGACCAACAGCTGCTCAGTGTCTTAGCCATCCATGGTTCAGCGCAGGACCCAGAACTCTTGAGCCCTCACGGACTAATATGCAACCTGATGGAATCAACATGGATTCATTTGAAAAGAGAAAGAAGGAACAAGAAAAGGCTGAGCATGAGTTGGTGGAAGTTGGTGTGAGGAATATAGCCATTGATGGATCTCCTGTGTCACTCAAAGACTCCCAACCTGTAAAGTCATCAACATAG 1638 0.42 MERKGINNNDYSSEDEGTQHYRRGGYHAVKIGDTFNNARYVVQSKLGWGHFSTVWLAWDTLKSHYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDGKKCVVKLLDHFKHSGPNGMHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLIDPCKDPRKSGAPLILPNTKDKALANNGTIQNSKIGNGDPTKNQKKKMQVNTKRVAQGCIEKESPEEAREDFKEPEQETCKNHVKSRVESSENKPNSSFSEGESTQTFEKDAAQGNHGNRKGSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSREFFNRHGELRHIRDLRFWPHHKILTEKYNFSEQDANDMADFLRPILDFDPEKRPTAAQCLSHPWFSAGPRTLEPSRTNMQPDGINMDSFEKRKKEQEKAEHELVEVGVRNIAIDGSPVSLKDSQPVKSST* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1615 545 MobiDBLite consensus disorder prediction 241 272 - -
Tpr4g1615 545 PANTHER SERINE KINASE-LIKE PROTEIN 8 543 - -
Tpr4g1615 545 ProSiteProfiles Protein kinase domain profile. 40 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1615 545 SUPERFAMILY Protein kinase-like (PK-like) 36 489 IPR011009 -
Tpr4g1615 545 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1615 545 Pfam Protein kinase domain 317 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1615 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Tpr4g1615 545 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Tpr4g1615 545 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Tpr4g1615 545 MobiDBLite consensus disorder prediction 237 307 - -
Tpr4g1615 545 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 543 - -
Tpr4g1615 545 SMART serkin_6 40 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1615 545 MobiDBLite consensus disorder prediction 273 295 - -
Tpr4g1615 545 CDD STKc_SRPK 29 480 - -
Tpr4g1615 545 Gene3D Transferase(Phosphotransferase) domain 1 123 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1615 Tpr-Chr4 16325237 16330712 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1615 9 531 EF-hand Containing Proteins AT5G22840 67.110 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Tpr4g1615 Pkinase 7.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1615 K08832 - gmx:100790060 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1615 4 16325237 16330712 Tpr4g1615 4 16325237 16330712 ECH