Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1595 ATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGAGAATCTGTTAAAGTTGATCCAGAGTTGGGATACATCCACATTTCTCAGGCTGCACTCGGGGAAGTGAAGAAAGACAAAGCAACTGAACCGGTTGTTGTGTATGTGAAAGTTGATGGTCAGAAGCTTGTTCTGGGAACTCTTATTAAGGATGCCATTCCTCACACAACTTTGAATATAGTTCTAGACAGGGTGGCTGAACTTTCCCATAATTCAAAAAATGCTGCTGTCCATTTTTCTGGATACAAAGTTCTTGACGATGGAGATTTTGACGACTCTGACGAATCTGATAGTGAAGCTGAACTTGCTCCTTTGACGGAACCTGCTGAGGCTGCAAAGGAGCTTGGAAAACCTGCTGCTGAAACTGGTGCAGTGGCAAAGCAAGTCGTCAAGCGTGTGAAAGTTGAAGGTGAATCTGATTCTGATTCTTCTGAGGAGTTTGATTCTGATAGTGAGGACAGTGAAAGTGAAGAAGAGACTCCCACTCCTGTTAAGAAGGTGGATCAGGGCAAGAGCATCAAGGGAACAAATAAGAATGCACCAAAAGCCCCAGTTCCTACCAAGAAGACTAAAATTGCTACTCCTGAAAAGACTGATTCTGATTCTGATGACGATATTAGTGATGAAGATATCAGTGATGATGATATTAGTGATGAAGATTCTAGTGATGAAGAGACTCCTGTTCAGAAGGGCAAGAATAACAAGAGACCAAATGAGGCTGCACCACAAACTCCAGTTTCTGCCAAGAGAGCTAAAAATGCTACTCCTGGAAAGACTGATGATAAAAAAGCTGTACACATAGCCACTCCCCATCCTAACAAGAAAGGTGGAAAAACTCCTCAGAATGGTGCTAAGGATCAGTCTCCCAGTTCTAGCAAGTCTAAAAAGTCCAAGCAAGGCCGTCGTTGA 939 0.4313 MEFWGAEVKVGESVKVDPELGYIHISQAALGEVKKDKATEPVVVYVKVDGQKLVLGTLIKDAIPHTTLNIVLDRVAELSHNSKNAAVHFSGYKVLDDGDFDDSDESDSEAELAPLTEPAEAAKELGKPAAETGAVAKQVVKRVKVEGESDSDSSEEFDSDSEDSESEEETPTPVKKVDQGKSIKGTNKNAPKAPVPTKKTKIATPEKTDSDSDDDISDEDISDDDISDEDSSDEETPVQKGKNNKRPNEAAPQTPVSAKRAKNATPGKTDDKKAVHIATPHPNKKGGKTPQNGAKDQSPSSSKSKKSKQGRR* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1595 312 MobiDBLite consensus disorder prediction 143 312 - -
Tpr4g1595 312 MobiDBLite consensus disorder prediction 290 304 - -
Tpr4g1595 312 MobiDBLite consensus disorder prediction 211 232 - -
Tpr4g1595 312 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Tpr4g1595 312 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 213 304 - -
Tpr4g1595 312 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 150 211 - -
Tpr4g1595 312 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 170 - -
Tpr4g1595 312 MobiDBLite consensus disorder prediction 264 278 - -
Tpr4g1595 312 Gene3D Nucleoplasmin core domain 1 99 - -
Tpr4g1595 312 MobiDBLite consensus disorder prediction 151 167 - -
Tpr4g1595 312 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 170 - -
Tpr4g1595 312 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 150 211 - -
Tpr4g1595 312 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 213 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1595 Tpr-Chr4 15975529 15979820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1595 1 209 C2H2 Transcription Factor Family AT3G44750 42.654 4.79e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1595 - - cam:101503096 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3808 7 47163619 47167090 Tpr4g1595 4 15975529 15979820 PCT