Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1589 ATGAGATTGGAGAAGTGCTGGTTCTGTTCTTCTACTGTATATCCTGGACATGGAATTCAGTTTGTTCGTAACGATGCAAAGATTTTTCGATTTTGTAGATCTAAGTGCCACAAGAACTTTAAAATGAAGAGAAACCCTCGTAAAGTAAAATGGACCAAGGCATATAGGCGGGTGCATGGAAAGGATATGACACAGGACTCAACATTCGAGTTCGAGAGAAAGCGCAACAGGCCTGAGAGATACGACAGGAATCTTGCTGAAAATGTCCTCAAGGCCATTCCAAAGATTGATAAGATCAGAGTCAGCAGGGAAGAGAGTCACCACAAGAATAGGATGAAGGGCAAGAAGCTGAAGGACCAGAAGGAAGATATTAAGGAGTATAACAATTCCATCCATATAATTAAAGCTCCTGCTGTGCTTAAAAATGAGATCAAAGTGGTGGTGTCCCAACAACAACCGGAAGAAAATCGTGCCATGGAAGAGTGA 486 0.4198 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREESHHKNRMKGKKLKDQKEDIKEYNNSIHIIKAPAVLKNEIKVVVSQQQPEENRAMEE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1589 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Tpr4g1589 161 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Tpr4g1589 161 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Tpr4g1589 161 SMART 4TRASH 6 44 IPR011017 -
Tpr4g1589 161 MobiDBLite consensus disorder prediction 100 121 - -
Tpr4g1589 161 PANTHER 60S RIBOSOMAL PROTEIN L24 1 161 IPR000988 -
Tpr4g1589 161 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Tpr4g1589 161 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Tpr4g1589 161 PANTHER BNAA04G10330D PROTEIN 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1589 Tpr-Chr4 15881367 15888057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1589 1 161 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 70.186 4.01e-82 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1589 K02896 - gmx:100306000 286.574