Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1570 ATGGAATCACCAATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGAGAATCTGTTAAAGTTGATCCAGAGTTGGGATACATCCACATTTCTCAGGCTGCACTCGGGGAAGTGAAGAAAGACAAAGCAACTGAACCGGTTGTTGTGTATGTGAAAGTTGATGGTCAGAAGCTTGTTCTGGGAACTCTTATTAAGGATGCCATTCCTCACACAACTTTGAATATAGTTCTAGACAGGGTGGCTGAACTTTCCCATAATTCAAAAAATGCTGCTGTCTATTTTTCTGGATACAAAGTTCTTGACGATGGAGATTTTGACGACTCTGACGAATCTGATAGTGAAGCTGAACTTGCTCCTTTGACGGAACCTGCTGAGGCTGCAAAGGAGCTTGGAAAACCTGCTGCTGAAACTGGTGCAGTGGCAAAGCAAGTCGTCAAGCGTGTGAAAGTTGAAGGTGAATCTGATTCTGATTCTTCTGAGGAGTTTGATTCTGATAGTGAGGACAGTGAAAGTGAAGAAGAGACTCCCACTCCTGTTAAGAAGGTGGATCAGGGCAAGAGCATGAAGGGAACAAATAAGAATGCACCAAAAGCCCCAGTTCCTACCAAGAAGACTAAAATTGCTACTCCTGAAAAGACTGATTCTGATTCTGATGACGATATTAGTGATGAAGATATCAGTGATGATGATATTAGTGATGAAGATTCTAGTGATGAAGAGACTCCTGTTCAGAAGGGCAAGAATAACAAGAGACCAAATGAGGCTGCACCACAAACTCCAGTTTCTGCCAAGAGAGCTAAAAATGCTACTCCTGGAAAGACTGATGATAAAAAAGCTGTACACATAGCCACTCCCCATCCTAACAAGAAAGGTGGAAAAACTCCTCAGAATGGTGCTAAGGATCAGTCTCCCAGTTCTAGCAAGTCTAAAAAGTCCAAGCAAGGACGTCGTTGA 951 0.429 MESPMEFWGAEVKVGESVKVDPELGYIHISQAALGEVKKDKATEPVVVYVKVDGQKLVLGTLIKDAIPHTTLNIVLDRVAELSHNSKNAAVYFSGYKVLDDGDFDDSDESDSEAELAPLTEPAEAAKELGKPAAETGAVAKQVVKRVKVEGESDSDSSEEFDSDSEDSESEEETPTPVKKVDQGKSMKGTNKNAPKAPVPTKKTKIATPEKTDSDSDDDISDEDISDDDISDEDSSDEETPVQKGKNNKRPNEAAPQTPVSAKRAKNATPGKTDDKKAVHIATPHPNKKGGKTPQNGAKDQSPSSSKSKKSKQGRR* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1570 316 MobiDBLite consensus disorder prediction 147 316 - -
Tpr4g1570 316 MobiDBLite consensus disorder prediction 294 308 - -
Tpr4g1570 316 MobiDBLite consensus disorder prediction 215 236 - -
Tpr4g1570 316 Pfam Nucleoplasmin-like domain 7 97 IPR041232 -
Tpr4g1570 316 MobiDBLite consensus disorder prediction 268 282 - -
Tpr4g1570 316 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 216 308 - -
Tpr4g1570 316 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 154 215 - -
Tpr4g1570 316 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 172 - -
Tpr4g1570 316 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 216 308 - -
Tpr4g1570 316 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 172 - -
Tpr4g1570 316 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 154 215 - -
Tpr4g1570 316 MobiDBLite consensus disorder prediction 155 171 - -
Tpr4g1570 316 Gene3D Nucleoplasmin core domain 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1570 Tpr-Chr4 15656148 15660413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1570 5 213 C2H2 Transcription Factor Family AT3G44750 43.128 5.59e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1570 - - cam:101503096 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1570 4 15656148 15660413 Tpr4g1570 4 15656148 15660413 ECH