Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1558 ATGGAAAATCACAAGACACCCTTTTCCCTATGTCTTGATACCAAGGATGTTGTGATTGTTAAACCCTCCAAACCCACACCTTCTGAAATTCTTTCACTCTCTACCATTGACAATGATCCTAACATCAACATTCTTTGCCAAACAATTTATGTCTACAAAGCAAATCATGATCTCACAAATGACCAAAAAGACCCTGCTTGTGTAATCAAAGAAGCACTCTCAAAGGCTTTAGTTTACTATTATCCTCTTGCAGGCAAGATAACAACACTTGATGATGGAAAACTTGGAATCAACTGCAACGGCGACGGAGTTCCATTCTTAGAATCAAATGCTAATTGTGAACTCTCTTCTCTTCATTATCTTGAAGGGATTGATGTTCCAACAGCACAAAAACTTGTGTTTGATAATCCTTCACAAGACCAAACAAGTCCTCATCCTTTGGTTTTTAAGGTTACAAAGTTTCTTTGTGGTGGTTTCACAATTGGAATGGGATTGTCACATAGTGTTTGTGATGGTTTTGGTGCATCAAAATTCTATAGAGCACTTGTTGAATTTGCAAGTGGAAAAAATGAACCTTCTTTGAAACCTGTTTGGGAGAGAGAGAGATTAATAGGAAAAAGTTATCTTAAGGAAGAAGAAACATTCAAATTTCTTATAGATAAAACTTCATTAGCAACTTCACCTTTTTTACCAACAAAAGAAATTTCACATGAATGTTTTAATTTAAATGGTGACACTATAAAAATGCTAAAAATGAAACTAATGAAAGAAAGTGGTGATGATAATAATGTGATGAAGGAAAGTTTCACAACACTTGAAACACTTGGTGCATATGTTTGGAGATCAAAAGTTAGAGCTTTGAAATTGAACAAAGATGGAAAAACTATGTTTTGTTTAGCAATAGGTGTGAGAAAAGTATTAGATCCACCTTTGCATGAAGGGTATTATGGTAATGCTTTTGTAGCTTCAAATGTTGTGTTAAAAGTGAAAGACCTTAATGAAAAACCACTTTTTGAAGTTGTGAAGCTTATCAAAGAGAGTAAGAAACTTGCTTTAAATAATGAATATATAAGAAATTCAATTAACATGTTGGAGACAATGAGGAAAGGGAAGATTAAGATTGAAGGAACAGGTGCATCATTGGTTTTAACTGATTGGAGACAACTTGGTTTGTTACAAGAAGTTGATTTTGGATGGAAGAGTTCAGTTAATATTGTGCCTGTTCCTTGGAACATGTTTGGTTTTGTGGATTTGTGTCTTTTTTTGCCGCCAAGTAACTTGAATCCTTCAATGAAAGGTGGAGTTAGGATCTTTGTGTCACTTCCAAAAGATTCAATGGCTAAGTTCAAGGAGGAGATGGAGTTCCTTAAGGTCATGAAAGTTGATGAAGATATATAG 1398 0.3448 MENHKTPFSLCLDTKDVVIVKPSKPTPSEILSLSTIDNDPNINILCQTIYVYKANHDLTNDQKDPACVIKEALSKALVYYYPLAGKITTLDDGKLGINCNGDGVPFLESNANCELSSLHYLEGIDVPTAQKLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGFGASKFYRALVEFASGKNEPSLKPVWERERLIGKSYLKEEETFKFLIDKTSLATSPFLPTKEISHECFNLNGDTIKMLKMKLMKESGDDNNVMKESFTTLETLGAYVWRSKVRALKLNKDGKTMFCLAIGVRKVLDPPLHEGYYGNAFVASNVVLKVKDLNEKPLFEVVKLIKESKKLALNNEYIRNSINMLETMRKGKIKIEGTGASLVLTDWRQLGLLQEVDFGWKSSVNIVPVPWNMFGFVDLCLFLPPSNLNPSMKGGVRIFVSLPKDSMAKFKEEMEFLKVMKVDEDI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1558 465 Gene3D - 12 214 IPR023213 -
Tpr4g1558 465 PANTHER ACYL TRANSFERASE 4 4 457 - -
Tpr4g1558 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 457 - -
Tpr4g1558 465 Pfam Transferase family 15 455 - -
Tpr4g1558 465 Gene3D - 230 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1558 Tpr-Chr4 15495710 15497783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1558 12 451 Monolignol Biosynthesis Gene Families AT5G48930 27.412 3.66e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1558 K20240 - gmx:100801843 700.664