Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1516 ATGGCTAGCCAAAGAATTGGAGAAATTGGTTTGTCTGAGTCAGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATCACTAATTCAACATCAACCTTAATGAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTACAAGGAATTAAGATAAGAAATGATGAAGGAAAATCATCAGCTTTATTCACAAGTAAACCAGCAGCTACACTTGAAATGTTTCCTTCTTGGCCAATCAGATTCCAACAATCACCAAGAGTTGTAGCTTCTCTCACTTCTCCTTCTTTGACCATTCCATATGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAACAGAGCTACAATTTGAAACAGATTCTCCAATAAGTGTAAAAGCATCTTCATCAGATCATCATAATAATCATAATCATGTTTTTGATCAACAACTTCAGCAGGAGACAGGAACTGATGATAGCTTAAAAACAGGCACATCACAGAATCAATCAAAAGCCAAATCACATAATGAAAAGAAAAAGGGAGCTGTTTCAACATCAGAAAAGACACTTGATCCAAAGACACTGAGACGATTGGCACAAAACAGAGAAGCTGCAAAGAAAAGTCGTCTAAGAAAAAAGGCTTATGTGCAGCAGCTAGAGACAAGTAGATTAAGGCTATCCAATCTGGAACAAGACCTTCAAAGAGCACGCTCTCAGGGACTATTCTTGGGTTGTGGTGGTGGCAATATAAGCCCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTCGAAGAAGATCAACGACAATTGGCGGAACTTAGGGCCGGGCTGCAGGCAGCATTACCGGATAATGAATTGAGAGTGATTGTGGACGGATATTTGTATCATTACGATGAGCTTTTCCGATTGAAGGGCGTGGCTGTTAAATCAGATGTGTTTCACCTCATTAAAGGCATTTGGGCTTCTCCTGCTGAACGACCCTTCATTTGGATCGGTGGTTTCAAACCCACAGAGCTCATCACGATGTTGACACAACAGTTGGAACCCCTAGCGGAGCAGCAATTAGCAGGGATAATGGAACTAGGGAAATCGGCATATCAAGCAGAAGAAGCTCTTTCTAAAGGACATGAACAGCTCCACCACGCTATTGTTGACACCATCGCCGGAGGGGATGTCATTGACGGTGTTCAACAAATGGTTGCCGCCATGGCTAGAATTTCCAACCTTGAAGGATTTGTCTATCAGGCTGATCATTTGAGGCAACAAAGTCTTCACCAACTATGTCGAATACTGACAGTTCGTCAAGCAGCACGGTGTTTCCTTATTATCGGAGAGTATTATGGACGTCTTCGAGCTCTTAGTTCTCTTTGGGCTTCAAGACCACGAGAGAACTTGATGAACGATGATAATTCATGCCAAACAACCACGGAATTGCAAATGGTTCAACCTTCTCAGAGTCATTTCTCAAGTTTCTGA 1488 0.4241 MASQRIGEIGLSESGPSSQHVPYGVLHGITNSTSTLMNQGSAFDFGELEEAIVLQGIKIRNDEGKSSALFTSKPAATLEMFPSWPIRFQQSPRVVASLTSPSLTIPYGGSKSGGESTDSGSTELQFETDSPISVKASSSDHHNNHNHVFDQQLQQETGTDDSLKTGTSQNQSKAKSHNEKKKGAVSTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLETSRLRLSNLEQDLQRARSQGLFLGCGGGNISPGAAMFDMEYARWLEEDQRQLAELRAGLQAALPDNELRVIVDGYLYHYDELFRLKGVAVKSDVFHLIKGIWASPAERPFIWIGGFKPTELITMLTQQLEPLAEQQLAGIMELGKSAYQAEEALSKGHEQLHHAIVDTIAGGDVIDGVQQMVAAMARISNLEGFVYQADHLRQQSLHQLCRILTVRQAARCFLIIGEYYGRLRALSSLWASRPRENLMNDDNSCQTTTELQMVQPSQSHFSSF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1516 495 MobiDBLite consensus disorder prediction 106 197 - -
Tpr4g1516 495 Pfam Seed dormancy control 273 348 IPR025422 GO:0006351|GO:0043565
Tpr4g1516 495 Gene3D - 194 243 - -
Tpr4g1516 495 SUPERFAMILY Leucine zipper domain 195 237 IPR046347 GO:0003700|GO:0006355
Tpr4g1516 495 Pfam bZIP transcription factor 195 236 IPR004827 GO:0003700|GO:0006355
Tpr4g1516 495 Coils Coil 214 241 - -
Tpr4g1516 495 MobiDBLite consensus disorder prediction 174 197 - -
Tpr4g1516 495 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 237 IPR004827 GO:0003700|GO:0006355
Tpr4g1516 495 MobiDBLite consensus disorder prediction 106 139 - -
Tpr4g1516 495 SMART brlzneu 191 253 IPR004827 GO:0003700|GO:0006355
Tpr4g1516 495 PANTHER TRANSCRIPTION FACTOR TGA9 66 474 - -
Tpr4g1516 495 ProSiteProfiles DOG1 domain profile. 256 464 IPR025422 GO:0006351|GO:0043565
Tpr4g1516 495 MobiDBLite consensus disorder prediction 148 173 - -
Tpr4g1516 495 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 198 213 IPR004827 GO:0003700|GO:0006355
Tpr4g1516 495 PANTHER TRANSCRIPTION FACTOR TGA9 66 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1516 Tpr-Chr4 14914826 14923205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1516 141 495 bZIP Transcription Factor Family AT1G08320 63.408 6.62e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g1516 DOG1 5.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1516 K14431 - gmx:778195 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1516 4 14914826 14923205 Tpr4g1516 4 14914826 14923205 ECH