Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1481 ATGTCTTCCAAAAAGAAAAACCTTATAAGAACATTTTTCACTTCAAATGGAAGTTGTGGATCATGTGCAAAATCAAAAGCAATTCAAGTACACGAACCAACCCAAAAACCCAAAATTTCCATCAACCAAAAGATCACAAATCCAAGTAGTAAAGGTTCTTCCACTACAAATTCAGGTGAACCAAACGGCGCCGTTTGTAGCATCGACGACAGCGAAGATTTCTCCACCACTACCTTTTCTGAAGGTGAGACAACAAACAACTACTTTGTACCCAAACAAAGTCCACTGATGAACACCGTAGCGGTCGAGAAGGACTCGGAGGATCCATATCATGATTTCAAACACTCTATGCTTCAAATGATCTTCGAAAATGAGATCGATTCGGAGGATGATCTTCAAGATCTTCTTCGGTGTTTTCTTCATCTCAATTCTAGTTGTTATCACAGTGTGATTGTTAAAGTCTTCAATGAAATCTGCCACGAAGCTTTCCCCGACAAGGCTAGAAGTTACGGGAAGGTGGTGTGGGAAATGCCTTTGGTGGCTGATCGATGCGCAACGGCGCATGGAGGGCATTAG 576 0.4201 MSSKKKNLIRTFFTSNGSCGSCAKSKAIQVHEPTQKPKISINQKITNPSSKGSSTTNSGEPNGAVCSIDDSEDFSTTTFSEGETTNNYFVPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHSVIVKVFNEICHEAFPDKARSYGKVVWEMPLVADRCATAHGGH* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1481 191 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 171 IPR038933 GO:0045892
Tpr4g1481 191 MobiDBLite consensus disorder prediction 30 63 - -
Tpr4g1481 191 Pfam Transcriptional repressor, ovate 106 161 IPR006458 -
Tpr4g1481 191 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Tpr4g1481 191 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Tpr4g1481 191 MobiDBLite consensus disorder prediction 35 63 - -
Tpr4g1481 191 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1481 Tpr-Chr4 14566058 14567747 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr4g1481 Ovate 6.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1481 - - mtr:MTR_4g052040 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1481 4 14566058 14567747 Tpr4g1481 4 14566058 14567747 ECH
Tpr7g3876 7 47968418 47969279 Tpr4g1481 4 14566058 14567747 PCT