Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1474 ATGGAATCTAAGATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGTGCTTTTGGTGCTGCTATTCTTGTTAATCATAAAGCTGAGAAGAAAAAATATGTGTTGAAGAAAATCAGGCTTGCTAGGCAGACTGAAAGATGTAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCAAGAATCAAGCATCCTTACATTGTGGAATTTAAGGAAGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACCGGATACTGTGAAGGTGGAGACATGGCTGAAACGATGAAAAAATTAAACGGCACTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTTTTGGCAGTAGAATACCTTCATTCGAATTATGTTTTACATCGCGACTTAAAGTGTTCCAACATCTTTCTTACAAAGGATCAGGATATTCGCCTTGGTGATTTTGGTCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCGAATTACATGTGTCCTGAACTGCTTGCAGATATTCCGTATGGATTCAAATCAGATATTTGGTCCTTAGGCTGCTGTGTATACGAAATGGCTGCTCATCGCCCTGCCTTTAAAGCATTTGATATGGCAGGATTGATAAGCAAGATAAATCGTTCCTCGATCGGCCCTTTGCCTCCGTGTTATTCCCCTTCATTGAAAATACTAATAAAAGGCATGTTGAGAAAAAGTCCTGAGCATCGACCAACAGCATCTGAAGTTTTGAAGCACCCTTATTTGCAACCTTACGTTGATCAATATCGTCCATCTTTTGCTCCTCAAACAGCCTTTTCTCCCGAAAAACCAATTTCTGCTGTCAATGATACTAAAAGACGCATGGCTGAAAGTCAGAACAGTACTAGTTCAAGTAGTGACAAAGATAGTTTAATGTCAAATGACAGAAACATTGCAACAACAGCGCCGAAGTGTGATAGCACAGCCACAGATATGGATATTGATGATGATGGCTCAGAGAATCTCCAGGAGGTGATAAAATCATCTCATAATGAACAGCATTCTAATGTTGAATCTAAACTGCAGCCAAGAACAATCAGAAATATAATGATGGCATTGAAAGAAGGGAGAGGTAGAGAAGCTACTTCTCCGATGAGAGGTAGAGAAGTTACTTCTCCGATGAGAGGCAGTCGTGTAAAGGCTGGTGGAGTATCGACGCAGAAAGTAAATACAGACATGCCGTCTAAATTGCCTAAACCGACTTTCATTGCTCCGAGTTTGAAGCCTAATTTAGAGTCACCAACTGTTCCACTAAAGGCATCCCCTGATTCTTCGAAACGAATATATGGATCGCCTCATTCAAAGCTTCAGTTGCTGATGACAGAGCCGTCGCCAAAAGTTAAACCGAAACAAGATATGACTCCACCATCTGGTTCTATCAAACAACAAGGAGAAGGAGATGGAGTTCCTCCTAGGCCAAGGCAAAGAACTCCCCCGAGCTTACTTCGACGACCTACTTTTCCAGGACGAATGAGGCTTGCAGGGATTGATGTTCCAAATGCAGCGAACGATAGCGGGAAGCTAGGTCCAAGTAATATAGGGCAGGAGTCTGAGATGAGCCACTGTCAGTTGTTAAATGGAAACGTACCACGTATTTCTAGACCGTTTATTAGAGAACCTCAGAATGCTTTTGAAAGAAGTTCTAAAGGAATGCAAACAGACAGTAGTAATTCTGCCTCGTCTTCAGTTTCAATTCATGGATGTGAACTTGCTGATGATGCAACAACTTTTATTGACATGAGAGAACATACTCTTCCTGATCATGACAATGAAACAAATGTTGTCGGTGTTGAATCATATCCAGACCGCAGCTCGTCGACAACCTGTACACATTGTAAGATGGCTGAAGAAGTGTCAGAGGAAACCTGTGAAGTCACCATGAATTTTCAGAGTACTATTAGTAGTAATGAAAAAGTGAGTTCCAATTTAACTCTTGATCGCCCTGCTGAAAATTCTAAGGAAATGTTTGCTTCGGAATATAGTCATCCGAGAAATCAGACAACTACATCTACTGCTTCCGTGTGTGATAATAGATCTGTTGACCCGCCTGCTGAAGCGGCCGACGAAATCGAAGATCTTCGAGATATTTCCAAGGAAATGGATTTAACCAAGTCTCCCAAACATCCACCCTCAATTTCTGGAGAAAACGCTGTTTGTGAAGAAGTTGGTTCGGTAAACAAACTCAATAATAGGCCTGAAACTGTCACTGGTGATGACAAATTCACGGTGAAGGAGCGATTGTCGTTGGTCGCTGAAACTGATCCTATAACTACTGCTACTAAAATACCGAACCAGAAAGTTTCGCAAGAGAAAGGAACTGTCACGCAGAATCCAGCAGCACAAGAAAGGCCAGATACTAGTCATCTTCCTGCAGCCTTTGACGAAGTCATCCATGTTATTCGACATAGTAGTTACCGTGTTGGGAGTGATCAACCGGTAATGGAATCAGTCGAAATGGGGGTTCAGAATGTCGATGTTGGTAAGTTTATCAATGTTATGAGGGATGACATCGAAAAGAGAAACATAAGCTCTCCGATGACTCTTAAATCTTCGAGTTCCTCCGAATCCGCAAGCTTTAAATCTAGTATTTCTGATCAGTTGGAAATGAAAAACACAAACACAAGTTTCTCCGACGCTACGAGCTTGAAACCGAGCATTCCGGATCATCCTAGTCTTAAGGAACAAGAAGTGAGCAACACTGTTTCTTCAGTTTCAGAATCTGATTCATCCGAGCTTGGTAAATGCAACACTCCTACAACCGAAGACAAACCTCCGGTGAAGGAAATACTCGACGTGAAATCTTTCAGGCAGAGAGCCGAAGCACTTGAAGAGCTTTTGGAATTGTCTGCAGATTTGTTGCAGCAAAATAGACTGGAGGAACTTCAAGTTGTTCTAAAGCCATTCGGTAAAGATAAGGTCTCTCCGCGAGAGACAGCGATTTGGTTAGCCAAGAGTCTTAAGGGAATGATGTCTGAAGAAAACGGAGGACGCTGTTCATCATGA 3063 0.4215 MESKMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAETMKKLNGTYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKILIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFAPQTAFSPEKPISAVNDTKRRMAESQNSTSSSSDKDSLMSNDRNIATTAPKCDSTATDMDIDDDGSENLQEVIKSSHNEQHSNVESKLQPRTIRNIMMALKEGRGREATSPMRGREVTSPMRGSRVKAGGVSTQKVNTDMPSKLPKPTFIAPSLKPNLESPTVPLKASPDSSKRIYGSPHSKLQLLMTEPSPKVKPKQDMTPPSGSIKQQGEGDGVPPRPRQRTPPSLLRRPTFPGRMRLAGIDVPNAANDSGKLGPSNIGQESEMSHCQLLNGNVPRISRPFIREPQNAFERSSKGMQTDSSNSASSSVSIHGCELADDATTFIDMREHTLPDHDNETNVVGVESYPDRSSSTTCTHCKMAEEVSEETCEVTMNFQSTISSNEKVSSNLTLDRPAENSKEMFASEYSHPRNQTTTSTASVCDNRSVDPPAEAADEIEDLRDISKEMDLTKSPKHPPSISGENAVCEEVGSVNKLNNRPETVTGDDKFTVKERLSLVAETDPITTATKIPNQKVSQEKGTVTQNPAAQERPDTSHLPAAFDEVIHVIRHSSYRVGSDQPVMESVEMGVQNVDVGKFINVMRDDIEKRNISSPMTLKSSSSSESASFKSSISDQLEMKNTNTSFSDATSLKPSIPDHPSLKEQEVSNTVSSVSESDSSELGKCNTPTTEDKPPVKEILDVKSFRQRAEALEELLELSADLLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEENGGRCSS* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 785 804 - -
Tpr4g1474 1020 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 373 411 - -
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 863 904 - -
Tpr4g1474 1020 Gene3D Transferase(Phosphotransferase) domain 1 90 335 - -
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 912 937 - -
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 454 506 - -
Tpr4g1474 1020 CDD STKc_Nek 7 262 - -
Tpr4g1474 1020 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1002 - -
Tpr4g1474 1020 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1002 - -
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 292 312 - -
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 861 942 - -
Tpr4g1474 1020 SUPERFAMILY Protein kinase-like (PK-like) 5 317 IPR011009 -
Tpr4g1474 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Tpr4g1474 1020 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1474 1020 MobiDBLite consensus disorder prediction 785 803 - -
Tpr4g1474 1020 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1474 1020 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Tpr4g1474 1020 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1474 Tpr-Chr4 14512653 14518576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1474 12 273 MAP Kinase Kinase Kinase AT3G06030 32.014 6.28e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Tpr4g1474 Pkinase 2.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1474 K08857 - gmx:100818747 1431.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1474 4 14512653 14518576 Tpr4g1474 4 14512653 14518576 ECH
Tpr7g3880 7 47999947 48006853 Tpr4g1474 4 14512653 14518576 PCT