Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1471 ATGGTATCTATTCAGATTAAATTTCACATTTTTCTCTTATTTTCCCTTATGATTATAATGTGTTATGGTGAAACCAATCCAAATGATCTCAAAATTCTGATTGATTTCAAGAAAGGGTTGAAGAATCCAGAGCTTCTGAAATGGCCTGATAATGGTGATGATCCATGTGGTTCACCTTCATGGAATTATGTGTACTGTTCTAAAGGTAGAGTTACTCAAATTCAAGCTAAGAATCTTGGTCTTAAAGGTTCATTGCCTTCAAATTTTAATCAACTTTCAGAGCTTCAAAATTTAGGTCTTCAAGGAAATAATCTTAGTGGAATGTTACCTAGTTTTAGTGGATTATCTAATTTGCAATATGCTTTTTTGGATTATAATCAATTTGAAGCAATCCCTTTAGATTTCTTCAATGGATTGACCAATATTCAGATTTTGACTTTGGAAGAAAACCCTTTGTTGAATGCTACTAATGGTTGGTCATTTCCTTTGGATTTGAAAAATTCAGCTCAATTAACAACTCTTTCGTTGGCGAATTGTAATTTGGTTGGTACATTACCTGATTTTCTCGGCACATTGTCTTCATTATCAGAATTGAGGCTTTCAGGTAACAGAATTTCGGGTGAAATTCCAGTTAGTTTTGGTCAATCGTCGATACAGGTTCTATGGTTGAATGATCAACAAGGCGGTGGAATGACAGGTTCTATTGATGTTATTGGTTCAATGACGTTTTTGAAACAAGTTTGGTTACACGGAAACAAGTTCACCGGAACAATTCCATCGAATATTGGTAATCTCACTTCTCTACAAGATCTTATCCTCAATAGTAATCAACTTGTAGGTTTGATTCCAAATTCATTAGCAAATATGGAACTTAAAACACTTGATTTAAATAATAACAAGTTCATGGGTCCAATACCGAAGTTTAAGGCTGCAAAAGTATCATATGATTCTAATTTCTTTTGTCAAACTAAACCTGGTTTTGATTGTGCTTCTGATGTTAATGTCTTGTTGGATTTTCTACGTAATGTGAATTATCCGTCAAATCTTATTAGTCAATGGGTTGGTAATGATCCTTGTGGACAACCATGGTTTGGATTGAGATGCAATAACGCGAAGGAGGTATCGATGATTAATTTGCCTAATCAAAAGCTTAATGGTACTTTGAGTCCTTCACTTGCTAAGTTAGTTTCATTACTTCAAATTAAGCTTGCAGGAAACAATTTAAATGGCAAAGTTCCTAGTAATTTTACTGACTTGAAATCACTGACGTTGTTGGATTTGAGTGATAACAATTTTGAACCTCCATTGCCAAATTTTCACGATGGTGTGAAAGTTATCACTGATGGTAACCCTCTTTTTGTTGATCACTCTAGAACGAGTCCCGTTCCTATTAGCAGTCCACCACCTTTAAGTGGTCCACCTTCACCACACATTGTGTCGCCGCCGCCACTGCCATTGCCATCTCCATCTCCATCGCCATCCTCCGTTATTCCACATCCCTCTAGTCAAAGTCCAAGCTCTGATCAATCTAGGAATGTCGAATCAAAGGCTCAACCGAGTAACTCACATGGATTCAAAACAGTAACTATAGTGTCTGGAGTTGCAGCTGCATTGGTAGCTCTTTTGGTCATTTGTCTCTTAGTATTATGTTGTATGGAGAAGAAGAAAAAAGGTTCAATTGATGGTTTTAGTTCCGTTGTGGTTAAAACTCAAGATTCATCTGATCCAAACGCGATGGTTAAACTTGCCGTGTCAGATAGCAGCAACACTGGGAACTTATCCACAACTACAGGAACAAGTTCTCTAACTAGTGGCGAAACCGGATACTATCATGTTGTTGACTCCGGTAACCTTGTCATCTCAGTTGATGTTATACGCAAGGTCACAAATAATTTTGCTTCGGAAAATGAACTCGGCCGTGGAGGATTTGGAACCGTTTACAAAGGTGAACTGGAAGACGGAACAAAAATAGCAGTGAAAAGAATGGAATGTGGAATTATTAGCAGTAAAGGAATTGATGAGTTTCAAGCAGAAATAGATGTCCTTTCGAAGGTTCGGCACCGACATTTGGTATCCCTTCTAGGCTATTCCATTGAAGGAAATGAGAGGCTTTTGGTTTATGAATACGTGCCTCTTGGTGCTTTAAGCAGACATCTTTTCCATTGGAAAAGCTTGAATTTGGACCCTTTGTCTTGGCCACATAGGCTTGCAATAGCACTTGATGTTGCTAGAGGGATGGAATACCTTCACAGTCTTGCTCGACAGACCTTCATCCATCGAGATCTCAAGTCTTCTAATATCCTACTTGGAGATGATATTCGAGCCAAAGTTTCTGATTTTGGTTTGGTGAAACTTGCACCAGATGGTGAAAAGTCTATGGCAACAAGACTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACGACTAAAGTGGATGTGTTCAGCTACGGTGTGGTATTGATGGAACTTCTGACCGGATTAATGGCTCTTGACGAGAGCCGACCAGAGGAAAACCGATACTTAGCCGAATGGTTTTGGCAAATCAAATCAAACAAAGAAAAGCTATTGGCTGCCATCGATCCAGCACTTGATGTAAGCGAAGAGACTTTCGAGAGTTTTTCCACTGTAGCTGAACTTGCCGGACATTGCACTGCTAGAGAAGCAAATCATAGGCCAGATATGGGGCATGCAGTCAAGGTGCTGTCGGAATTAGTAGAGAAATGGAGACCGGTTGATGAAGAATTCGATTATAGCGGTGGCGTTGACTTCGGTCAACCGCTTCCGCAATTATTGAAATTTTGGAAGGAAGCAGACAGCAACGATGTAAGTTATACAAGTCTTGAAAATAGTAAAGGAAGTATACCAAATAAGCCTTCTGGTTTTGCAGAATCTTTTACATCTTCTGATGGCAGATGA 2937 0.3892 MVSIQIKFHIFLLFSLMIIMCYGETNPNDLKILIDFKKGLKNPELLKWPDNGDDPCGSPSWNYVYCSKGRVTQIQAKNLGLKGSLPSNFNQLSELQNLGLQGNNLSGMLPSFSGLSNLQYAFLDYNQFEAIPLDFFNGLTNIQILTLEENPLLNATNGWSFPLDLKNSAQLTTLSLANCNLVGTLPDFLGTLSSLSELRLSGNRISGEIPVSFGQSSIQVLWLNDQQGGGMTGSIDVIGSMTFLKQVWLHGNKFTGTIPSNIGNLTSLQDLILNSNQLVGLIPNSLANMELKTLDLNNNKFMGPIPKFKAAKVSYDSNFFCQTKPGFDCASDVNVLLDFLRNVNYPSNLISQWVGNDPCGQPWFGLRCNNAKEVSMINLPNQKLNGTLSPSLAKLVSLLQIKLAGNNLNGKVPSNFTDLKSLTLLDLSDNNFEPPLPNFHDGVKVITDGNPLFVDHSRTSPVPISSPPPLSGPPSPHIVSPPPLPLPSPSPSPSSVIPHPSSQSPSSDQSRNVESKAQPSNSHGFKTVTIVSGVAAALVALLVICLLVLCCMEKKKKGSIDGFSSVVVKTQDSSDPNAMVKLAVSDSSNTGNLSTTTGTSSLTSGETGYYHVVDSGNLVISVDVIRKVTNNFASENELGRGGFGTVYKGELEDGTKIAVKRMECGIISSKGIDEFQAEIDVLSKVRHRHLVSLLGYSIEGNERLLVYEYVPLGALSRHLFHWKSLNLDPLSWPHRLAIALDVARGMEYLHSLARQTFIHRDLKSSNILLGDDIRAKVSDFGLVKLAPDGEKSMATRLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEENRYLAEWFWQIKSNKEKLLAAIDPALDVSEETFESFSTVAELAGHCTAREANHRPDMGHAVKVLSELVEKWRPVDEEFDYSGGVDFGQPLPQLLKFWKEADSNDVSYTSLENSKGSIPNKPSGFAESFTSSDGR* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1471 978 CDD STKc_IRAK 638 911 - -
Tpr4g1471 978 Gene3D Phosphorylase Kinase; domain 1 594 709 - -
Tpr4g1471 978 Gene3D Ribonuclease Inhibitor 27 326 IPR032675 -
Tpr4g1471 978 Pfam Protein tyrosine and serine/threonine kinase 635 906 IPR001245 GO:0004672|GO:0006468
Tpr4g1471 978 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Tpr4g1471 978 Pfam Leucine rich repeat N-terminal domain 330 369 IPR013210 -
Tpr4g1471 978 SMART serkin_6 632 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1471 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672|GO:0006468
Tpr4g1471 978 SMART LRR_typ_2 265 288 IPR003591 -
Tpr4g1471 978 SMART LRR_typ_2 419 441 IPR003591 -
Tpr4g1471 978 SMART LRR_typ_2 192 216 IPR003591 -
Tpr4g1471 978 SMART LRR_typ_2 115 138 IPR003591 -
Tpr4g1471 978 SMART LRR_typ_2 92 114 IPR003591 -
Tpr4g1471 978 SUPERFAMILY L domain-like 25 308 - -
Tpr4g1471 978 SUPERFAMILY L domain-like 330 439 - -
Tpr4g1471 978 MobiDBLite consensus disorder prediction 955 978 - -
Tpr4g1471 978 ProSiteProfiles Protein kinase domain profile. 632 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1471 978 Gene3D Ribonuclease Inhibitor 331 456 IPR032675 -
Tpr4g1471 978 SUPERFAMILY Protein kinase-like (PK-like) 611 908 IPR011009 -
Tpr4g1471 978 MobiDBLite consensus disorder prediction 499 522 - -
Tpr4g1471 978 Gene3D Transferase(Phosphotransferase) domain 1 712 924 - -
Tpr4g1471 978 PANTHER OSJNBA0070M12.3 PROTEIN 6 978 - -
Tpr4g1471 978 PANTHER OSJNBA0070M12.3 PROTEIN 6 978 - -
Tpr4g1471 978 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524
Tpr4g1471 978 MobiDBLite consensus disorder prediction 485 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1471 Tpr-Chr4 14474848 14479216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1471 70 908 Receptor kinase-like Gene Family AT5G49660 29.573 6.17e-81 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr4g1471 PK_Tyr_Ser-Thr 8.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1471 - - cam:101505581 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1471 4 14474848 14479216 Tpr4g1471 4 14474848 14479216 ECH