Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1469 ATGGGATTTTTGTTGAAACAAGCTTTGAAGACTCTTTGTGCTAGAAATCAGTGGTCTTATGCTGTTTTTTGGAAGATCGGTTGCAATAATTCAAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCCTTACCATCTGCTTTCCTTCCACAAATTGTTGGAACATCTAATTTGCCTTACCGAGATGGGGAAGGATGCTGGTTTTCTTCTGATTCTCAACTAAGGATTCAAGAGGACGACAGAGTCGGTTCATTGATTAACAAAATGATGGTGAATAGTTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGAGCGGCATTCACAGGAAATCATCAGTGGATTGTTTTGAACAATTTCATTAAAGATGCATATCCACCAGAGGTATTAACCGAGGTGCATTGCCAATTTTCAGCTGGAATGCAGGTTTGTGTTTTTAATTATGCTTCATGTTTTGCGATAATTTTTTGTATTACTTTTCCTGATCCAACATTGTATTCATGTTTGCAGACAGTGGCGGTTATTCCCGTGCTTCCCCACGGGGTTGTTCAACTTGGTTCCTTCTTGCCGATAATGGAGAATATCGGATTTGTGAATGATGTGAAGAACTTGATATTTCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCGGCAAGACTTTCTAATGGATCCGTGACTGGTTGTGTGCCTGTGTCATTTGATCCACAAATCATTACTCCAAGCTTCACTTCGTCAGTAGCTAATGGATCTAACCAACCGAGTACTTCATCACATGGTCCTATGCCTGTTGCTTCTCAACTACCTCCTTTTCGAAGTCGAGAAATAAATAGTCACCGTGGTACTGTATTAACACCTCAATCCCAAAACCTAAACCAGATATTTGATAGCCTTAGCCAACCAAAGGCTCAACGAGAGAATACAACTGTTAAGGCAGAAGCTGAAGTGATACCTGCAAATCTCGATTCTTCATGTCTGCAACCGCGTTCTGTTTCATATAATGCAAGATCTGCGTTCAATGAATTAACTGATTCAAATGTATCCAATCTGAATGGTTTCAGCCTTAAACATATGGAGCAACAAATGTTATCAGGTATTGGAAGGCAAAGTCACGGTAACCCTAATATGAATCCATCATCAAGTGGCTTAAATATGTCTCGATCGAAAACGGATGGAGGCCAAATTTATTATCAGAATTCTAACAACACTTCATTTCTTGGAGGAATCCCAATATGTAGTGGGATGAATAATAATCTTCTAAGGACAAATATGATTAACTGCTCGGTTTCAAACTCTCCCCAATTTTCCACCACCGGTTATTCCGGAACACAAAAAGTAGAGTTTGGAATTCAAAACAATAATTCAACTAAAGCTGCAAATCACATGCATGTAGAAGCTTTTGATCAAAAGAATCTTTCCAATGATTTAAAGCATGCTCAAGATGCTTTGGCTTCCACGGATCAAAGGATAGATGATTTGCTCGAGGCCCTAAAGATCCCGTCATCATCATCATCTCTTCACCATGAGGAACATGTGCCTATGAATGATCACATTCCTGATTTTCTTCGTGATTGCCTAGATAAAGATGTTACTAACCACCAAATGATGAAAACAAATTTTGAACAAGAAGAAGCTTGTACTCAACTTTCATCTGGTGACGATGACTTGTTTGATGTCTTGGGTTTGGATTTCAAAAGAAAACTGCTGAACGGAAACTGGAATTTGTTGTTTGCCGATGAAACAGATGCCAGTGCAGAAAAACATGACAAAAAGGCAATGTGTAAGAATTTTCCGGTTGTAGGTCATGATAATATTTTTCCGGTTAATGAAGCAATATCAAACAATGGCATGTTCTCTGGAACAAGCACTGATCACCTCTTAGATGCTGTGGTCTCAAAGAATCAATCTGCTGCGAATCAGAATTCTGATGAAATGTCTTGCAGGACCACAGTAACAAGGATTAGTACTGCGTCTGTTCTTTCTCCTACCGGAATGCAGATTATGCGCAATCATGTTGGCCAGGCTGCACCATTTGATTTTCCCAAGACGGAGGTTAAAACAGGTGCTGCAGAAACGAGTTCTCTGATTTCCGGCGGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACCACTTCCATATATGGTTCTCAACTTAGTTCATGGGTGGAAAATAGTAGCACCAATATGAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGGCCAGATGAAGTTAGCAAATCAAATCGTAAAAGGCTTAAACCAGGAGAGAACCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGCGTGAAAGAGTTGCGTGAAATTGTGCCTAATGGAGCAAAATGTAGCATAGATGCGCTTCTTGAACGAACTATCAAACATATGCTTTTCTTACAAAGTGTGACCAAGCATGCTGACAAGCTGAAACAGACTGGGGAATCGAAGATTATTAGTAAAGAAGGTGGTTTGTTATTAAAAGACAACTTTGAGGGAGGTGCTACATGGGCATATGAGGTTGGTTCACAATCTATGGTGTGCCCTATCATAGTTGAAGATCTTAATCATCCCCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTCTTTCTGGAAATAGCCGACTTAATCAGAGGATTAGGGTTAACTATCTTGAAGGGTGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTTCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTAGTTCGACTTTTGGAGCAAACAGTGAAGGGAGGTGCATCTTCATCAAATGCCGCAGTTGATAACAATAACATGATGGTTTATCATTCTATCCCACAATCCACCTAG 2883 0.4031 MGFLLKQALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSAFLPQIVGTSNLPYRDGEGCWFSSDSQLRIQEDDRVGSLINKMMVNSSVNVAGQGILGRAAFTGNHQWIVLNNFIKDAYPPEVLTEVHCQFSAGMQVCVFNYASCFAIIFCITFPDPTLYSCLQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGCVPGALLSEDYSARLSNGSVTGCVPVSFDPQIITPSFTSSVANGSNQPSTSSHGPMPVASQLPPFRSREINSHRGTVLTPQSQNLNQIFDSLSQPKAQRENTTVKAEAEVIPANLDSSCLQPRSVSYNARSAFNELTDSNVSNLNGFSLKHMEQQMLSGIGRQSHGNPNMNPSSSGLNMSRSKTDGGQIYYQNSNNTSFLGGIPICSGMNNNLLRTNMINCSVSNSPQFSTTGYSGTQKVEFGIQNNNSTKAANHMHVEAFDQKNLSNDLKHAQDALASTDQRIDDLLEALKIPSSSSSLHHEEHVPMNDHIPDFLRDCLDKDVTNHQMMKTNFEQEEACTQLSSGDDDLFDVLGLDFKRKLLNGNWNLLFADETDASAEKHDKKAMCKNFPVVGHDNIFPVNEAISNNGMFSGTSTDHLLDAVVSKNQSAANQNSDEMSCRTTVTRISTASVLSPTGMQIMRNHVGQAAPFDFPKTEVKTGAAETSSLISGGSKDNVGNCSQTTSIYGSQLSSWVENSSTNMKRENSVSTGYSKRPDEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFSVEANRDVTRMEIFMSLVRLLEQTVKGGASSSNAAVDNNNMMVYHSIPQST* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1469 960 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 168 959 - -
Tpr4g1469 960 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 144 - -
Tpr4g1469 960 MobiDBLite consensus disorder prediction 747 772 - -
Tpr4g1469 960 Coils Coil 472 499 - -
Tpr4g1469 960 MobiDBLite consensus disorder prediction 727 746 - -
Tpr4g1469 960 CDD bHLH_AtLHW_like 761 830 - -
Tpr4g1469 960 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 204 IPR025610 -
Tpr4g1469 960 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 168 959 IPR043561 GO:0003700|GO:0006355
Tpr4g1469 960 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 144 IPR043561 GO:0003700|GO:0006355
Tpr4g1469 960 MobiDBLite consensus disorder prediction 727 772 - -
Tpr4g1469 960 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 757 806 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1469 Tpr-Chr4 14427554 14434332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1469 544 940 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.311 1.31e-117 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1469 - - aprc:113857443 1266.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1469 4 14427554 14434332 Tpr4g1469 4 14427554 14434332 ECH