Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1468 ATGGGAACGTACTTTCATGGAAACAGCAACAGTTCTGAAATCCAACAACCGTCGGCAGAAGGTTTACAGACACTTTACCTTATGAATCCAAACTACGTACCTTATTCTCAGGAAACTCAAAATCCAACACAAAACATGCTTTTCGCTAATCCCAACGCTACCAACAATACTTCTCCTCACGCGCTTAATCTTGTTAAGTTCCCTCACGCGCCTTCATCATTCAATCAACACCACTTACTTGGAGTTACTATTCCACCATCTAATTTTCTTGGATCCAACTCAGCCGACACTCCCTCACAACAGTTTGAAGTTACTGGCTTTCATCCCTTTGCCTCGTTGGCGACCGCAGCTCACCGTCCCCAGTATAACCTGTGGGGAGTAGGATCAGGTAGTTTTGTACCTGATCAATCTGTCATGTCGACAACAACAGCAACAACTACTTCTACTAATAGATCGGAGTCCGCTGTTACTGTCGCCGTGACAGCTTCTGAGGCGGCGGAATTTCCGCCGCCTCATCATATTGGTTTTCACAGACCAGTTTATCAGCGCGGATTGTCTCTTAGTCTTTCGTCACAACAAACACCTTACCGGTCGCTTTCCAGAGAAATCGAAGTATCTCCGGGTAGCCGTGGAGGTGGAGACACCAGCGGAGTTTCGAGCATGCACGGTGTTGTTTTCGGGTCGAAGTATTTGAGAGTAGCACAAGAGCTTCTTGATGAAGTTGTGAATGTGGATAAGGGAATCATGAAAGGAGAATCTGGTGAAGGAGATAATAGTAATAATGAGAATAAAGAGAAGAGGAAAGCGAATATTGAAGCAAGTTCAAGTGGTGGAAGAGAAAACGATGGAGGGAAACAAGTTGCTGAGTTAAGCACTGCACAAAGACAAGAACTTCAAATGAAGAAGTCAAAGCTTGTTAGCATGCTTGATGAGGTGGATATACGGTACAAACAATACCACCATCAAATGCGAAGTGTGATATCATCATTTGAACAAGCAGCAGGATATGGAGCAGCCAAATCTTACACATCCCTAGCTTTAAAGACAATCTCAAAGCAATTTAGAAGTCTTAAAGATGCAATCTGTTCACAAATTAAGACAACTAGCAAGACTTTGGGTGAAGATGATTGCTTAGGAGTTAAGTTAGAAGGTTCTAGGCTTAGATTTGTCGATCACCATCTCCGACAACAAAGGGCACTACAGCAACTCGGAATGATTCAGACCAATGCTTGGAGGCCTCAAAGAGGCTTGCCGGAGCGAGCTGTTTCTGTTCTACGTGCTTGGCTTTTTGAGCATTTCTTGCACCCTTATCCCAAGGACTCAGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGTCAGGTGTCTAACTGGTTTATAAATGCCCGAGTTCGGTTGTGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAACGAAGGAGCAAGAGAAGAATAATAATGACTCCAATGATAACACAAATATATCAAAAGAATCAAGCAAAGAGTTGTGGTCAGCAAATACTACTACACAAGATTCAACTCCCACAAAACTTGATCAAATCAATATTCTTCATTCAAAAACTGAAAGCTTCAACAACCAAAACACTTCTCCAACTGAGATATCAAATTCACATAATTCATTGTCAACATCGAACACAAAGTTTGATGTTGAAAGAAATCATGACAACCCTTTAATGAGTGGAAATGAAAATCATCATGGTGATGGTTATGGAACATTCTCAATGGAAGATATTGGAAGGTTTAATGTTAGTGACCAATTGGCTCCAAGGTTTCATGGAAATGGAGTTTCTTTAACTCTTGGACTACCTCATAATGAAAATCTCCCTTTCTCTTCCACTCAACATGGATTTCTCTCTCAAGATTTACATATGGGAGGGAGGATCGAAATGGGAGAGAATGAAAATGAGTTTTGTGCCATTAATACTACTCCACCTTCTTCTCATTCAGGAACAAGTTATGAGAGTATTGATATTCAAAACAGAAAGAGGTATGCAGCAGCTCAATTGTTGAGAAATTTTGTGAACTAA 2055 0.4122 MGTYFHGNSNSSEIQQPSAEGLQTLYLMNPNYVPYSQETQNPTQNMLFANPNATNNTSPHALNLVKFPHAPSSFNQHHLLGVTIPPSNFLGSNSADTPSQQFEVTGFHPFASLATAAHRPQYNLWGVGSGSFVPDQSVMSTTTATTTSTNRSESAVTVAVTASEAAEFPPPHHIGFHRPVYQRGLSLSLSSQQTPYRSLSREIEVSPGSRGGGDTSGVSSMHGVVFGSKYLRVAQELLDEVVNVDKGIMKGESGEGDNSNNENKEKRKANIEASSSGGRENDGGKQVAELSTAQRQELQMKKSKLVSMLDEVDIRYKQYHHQMRSVISSFEQAAGYGAAKSYTSLALKTISKQFRSLKDAICSQIKTTSKTLGEDDCLGVKLEGSRLRFVDHHLRQQRALQQLGMIQTNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQEKNNNDSNDNTNISKESSKELWSANTTTQDSTPTKLDQINILHSKTESFNNQNTSPTEISNSHNSLSTSNTKFDVERNHDNPLMSGNENHHGDGYGTFSMEDIGRFNVSDQLAPRFHGNGVSLTLGLPHNENLPFSSTQHGFLSQDLHMGGRIEMGENENEFCAINTTPPSSHSGTSYESIDIQNRKRYAAAQLLRNFVN* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1468 684 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 9 558 - -
Tpr4g1468 684 SMART prehox3 219 363 IPR006563 -
Tpr4g1468 684 SUPERFAMILY Homeodomain-like 412 477 IPR009057 -
Tpr4g1468 684 ProSiteProfiles 'Homeobox' domain profile. 408 471 IPR001356 GO:0003677
Tpr4g1468 684 SMART HOX_1 411 475 IPR001356 GO:0003677
Tpr4g1468 684 MobiDBLite consensus disorder prediction 531 551 - -
Tpr4g1468 684 MobiDBLite consensus disorder prediction 249 286 - -
Tpr4g1468 684 MobiDBLite consensus disorder prediction 191 217 - -
Tpr4g1468 684 CDD homeodomain 411 472 IPR001356 GO:0003677
Tpr4g1468 684 Pfam Associated with HOX 224 361 IPR006563 -
Tpr4g1468 684 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 558 - -
Tpr4g1468 684 MobiDBLite consensus disorder prediction 249 273 - -
Tpr4g1468 684 Pfam Homeobox KN domain 428 467 IPR008422 GO:0003677|GO:0006355
Tpr4g1468 684 Gene3D - 414 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1468 Tpr-Chr4 14374679 14380682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1468 1 683 Homeobox Transcription Factor Family AT2G35940 42.661 1.98e-134 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tpr4g1468 POX 1.3e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1468 - - mtr:MTR_4g051532 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1468 4 14374679 14380682 Tpr4g1468 4 14374679 14380682 ECH