Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1463 ATGGATGTTGATTCTTCGATGGTGGCAGAGAACGATCAGGATTCAACGGTGCAGAACAATGAAGAGAGAGATAAAATAGGTGAAACGCCGTCGGAGCAACAACCACAGCAGCAAGGTGCGGCAGCGGCTACAGCTGCTCAGATGCAGCATAGTCCGGTTGTTGGCCCGAGGCTAGCGCCGTGTTATACAGTGGTGGATGCGATTTTGGAAAAGAAGGAGGATGGACCAGGTCCGCGGTGTGGTCACACGTTGACAGCTGTGCCGGCGGTTGGAGAGGAAGGAACGCCGGGATACATTGGGCCGAGGCTGATTTTATTCGGCGGTGCTACGGCACTTGAAGGGAATTCTGCTGCTTCAGGGACTCCTACATCTGCAGGAAATGCAGGCATACGTTTAGCGGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCTCCAACCCCAAGGGCTGCGCATGTGGCCACCGCTGTGGGAACGATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGATTGTCGGCGGAGGACCTTCATGTTCTTGATCTCACACAGCAACGACCAAGATGGCACAGAGTTGGTGTTCCAGGGCCTGGACCAGGGCCACGATATGGACATGTTATGGCTTTGGTGGGGCAGCGATATCTCATGGCTATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTAGACACAGCTGCCAAGCCTTATGAATGGCGCAAACTGGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGCGTTCCATTGGCTAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCCGGTGTTTCACCATCTTCAAGATATCAGCATGCAGCGGTGTTTGTGAATGCAAGGCTCCATGTGTCTGGCGGGGCTCTTGGTGGAGGAAGGATGGTAGAAGATTCGTCGAGTGTTGCAGTGTTGGACACTGCTGCTGGCGTTTGGTGTGATACAAAATCTGTTGTTACTAGTCCAAGAGCGGGCAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAGTTGGTCCGGCGTTGCAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGTGGAATCTTGCTGGATGACCTGCTTGTTGCTGAAGATCTTGCTGCTGCGGAAACAACAAGTGCTGCTTCGCATGCTGCTGCTGCTGCAGCAGCATCTGATGTACAAATGGGACGAGTACCAGGACGATATGGATTTGTTGATGACCGAACAGGTCAAACAATGTCTGAAACGACTGCTGATGGTTCAGTTGTTTTGGGAACTCCAGTTGCTGCCCCTGTAAATGGTGACATGTATACTGATATCAGCCCTGAAAATGCCTTGCTTCAGGGGTCTAGGAGAACTAGCAAAGGAGTTGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGGCAAGAGAATGGAGATGTTGAATCACCTGATCGGGACCGCGGGGCTGAAGCTACCCCTAGTGGGAAACAAATATCTTCCATGATTAAGCCTGAACCTGGAGGCCCAAATAGTATTGCATCTGGTGGAGTCAGGCTGCATCACAGAGCTGTGGTTATTGCCGCTGAGACCGGTGGAGCATTAGGTGGCATGGTTAGGCAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGACGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAGCTATTAGATCGGCAGATGTCTATTAATAGTGTCCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTTCGACGGCAGTTTTTCTTGGATTGCAATGAGATTGCAGATCTTTGTGATAGTGCGGAGAGGATATTTTCTAGCGAACCAACTGTCATAAAGCTTAGGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATTGATTATCTATTCCTAGGAGATTATGTTGATAGGGGTCAACACAGCCTTGAAACTATAAGCCTTCTGCTTGCTTTGAAGGTTGAGTATCCAAACAATGTTCATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCACCGGATAAACCGTCTGTTTAATTGGCTTCCTCTTGCAGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCACTTGGAACAAATTGAGAATATTCAGCGTCCTATTACAATGGAAGCAGGATCAATTGTGCTGATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTAGAAGGGCTGCGACCAAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGAGTCATGGAATTTTGCAATAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTAATCACCCTTTTCTCAGCTACAAATTACTGCGGTACTGCAAATAATGCTGGGGCAATATTAGTTTTGGGGAGGGATCTTGTGGTGGTTCCTAAATTAATTCATCCAATACCACCTGCACTTTCTTCCCCAGAAACGTCACCAGAACGACATATTGAAGATACTTGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGTCGTCCTCCAGTAGCAAATGACCGTGGTTCGTTGGCTTGGATATAG 2982 0.4829 MDVDSSMVAENDQDSTVQNNEERDKIGETPSEQQPQQQGAAAATAAQMQHSPVVGPRLAPCYTVVDAILEKKEDGPGPRCGHTLTAVPAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPTSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRAGRYSADAAGGDASVELVRRCRHAAAAVGDLIFIYGGLRGGILLDDLLVAEDLAAAETTSAASHAAAAAAASDVQMGRVPGRYGFVDDRTGQTMSETTADGSVVLGTPVAAPVNGDMYTDISPENALLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGDVESPDRDRGAEATPSGKQISSMIKPEPGGPNSIASGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIKLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPIPPALSSPETSPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1463 993 MobiDBLite consensus disorder prediction 30 45 - -
Tpr4g1463 993 SUPERFAMILY Metallo-dependent phosphatases 647 952 IPR029052 -
Tpr4g1463 993 Gene3D - 626 960 IPR029052 -
Tpr4g1463 993 SUPERFAMILY Kelch motif 134 423 IPR015915 GO:0005515
Tpr4g1463 993 ProSitePatterns Serine/threonine specific protein phosphatases signature. 759 764 IPR006186 GO:0016787
Tpr4g1463 993 MobiDBLite consensus disorder prediction 538 552 - -
Tpr4g1463 993 SMART pp2a_7 662 946 IPR006186 GO:0016787
Tpr4g1463 993 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 993 - -
Tpr4g1463 993 Pfam Calcineurin-like phosphoesterase 690 897 IPR004843 GO:0016787
Tpr4g1463 993 Gene3D - 187 437 IPR015915 GO:0005515
Tpr4g1463 993 Gene3D - 63 186 IPR015915 GO:0005515
Tpr4g1463 993 MobiDBLite consensus disorder prediction 970 993 - -
Tpr4g1463 993 PIRSF STPPP_BSU1 28 993 IPR012391 GO:0004721|GO:0009742
Tpr4g1463 993 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 993 - -
Tpr4g1463 993 Pfam Galactose oxidase, central domain 214 267 - -
Tpr4g1463 993 CDD MPP_Bsu1_C 642 944 IPR041758 -
Tpr4g1463 993 MobiDBLite consensus disorder prediction 535 568 - -
Tpr4g1463 993 MobiDBLite consensus disorder prediction 1 49 - -
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 690 717 IPR006186 GO:0016787
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 725 752 IPR006186 GO:0016787
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 758 782 IPR006186 GO:0016787
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 796 822 IPR006186 GO:0016787
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 826 853 IPR006186 GO:0016787
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 886 906 IPR006186 GO:0016787
Tpr4g1463 993 PRINTS Serine/threonine phosphatase family signature 908 924 IPR006186 GO:0016787
Tpr4g1463 993 Pfam Kelch motif 321 366 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1463 Tpr-Chr4 14254946 14271382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1463 654 889 Calmodulin-binding Proteins AT5G63870 29.412 2.39e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1463 - - gmx:100788485 1727.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1463 4 14254946 14271382 Tpr4g1463 4 14254946 14271382 ECH
Tpr7g4108 7 50120354 50132485 Tpr4g1463 4 14254946 14271382 ECH