Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1459 ATGGGTGTCTCAGGGAAATGGATTAGAGCATTAGTTGGTCTAAAGAAATCAGAAAAGACTGGGTCCTCAGAGAAGGATGGGAATCAGAAGGATAGCAAGTCACGCCATCGGAGAAAGCATTCCATCGAAATCGACAATAGCAAACTTCAAAAAGAGCTTGATGATGTTGAAGCTACACCTATTGGGGATGCAGATCATGCAACTCCCCAATCAAACCTTGATACTCATTATTCTCCTTCTACTTCACAAGAAGCACAGTATACTGGACATAATCATCAAATATCAAGAGAAGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTTCGCTTGACACTGGAAAGTCAAACAGAACAACAGAAACTTCAGCAGCAGCTTGTAAACGAAGCTCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAATCCAAAATATTAAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCGCATCAGTGGCAGGCAGGATCTAGGCAGCAGGCTGTTTCTTCAGGGTTTGAACCTGATAGAAGTAGTTGGGGTTGGAATTGGTTGGAAAGGTGGATGGCTGTACGTCCTTGGGAGAATCGTTTTCTTGACATAAACACGAAAGACGGAGGAAAGGTAGACGAAGATGATGTTATGGATGGTAGAAATGGAATCAGACCTCAGTTCAGGTCTACTAACGCGAAATCAATACCTCCAAATATTCATCCAAGTGTTGCTGGTCATAAAACTGGTCCCTCTGTCTCTGATGGCTGTGATTCTTCTTCCACTAGCAAGTCAGCAGGTTTACTCGAGACATCGAACACACAATCTGTTAAACCAAAATCTAATACAAATGTTCAAAATTCCGTTGAAGAAACCAACTCAAAATCTGGATTTCCAAGATCTCAAAGTAATCCAAAGGAGAGAAAGTCGCAGGTAGATAAACAGGCGAAAAAGCGATTATCACTTCCTAACAATGGGGTTGGTTCTGGGGCTCAAACGGCCAAATATCCTACCAGATCTAACATGAAAGGGACACGTAGCACGCAAAAGCCTATAAGGGATAAGCCTAAGCCTAAGATCAATGAAGGCGGGGATGTGAGTCTTGCTAAATCTGTTCCACAGCCCACGGTTGTGTAA 1329 0.4394 MGVSGKWIRALVGLKKSEKTGSSEKDGNQKDSKSRHRRKHSIEIDNSKLQKELDDVEATPIGDADHATPQSNLDTHYSPSTSQEAQYTGHNHQISREEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLTLESQTEQQKLQQQLVNEARVREIEEGWCDSVGSVEEIQSKILKRQEAAAKRERAMAYALAHQWQAGSRQQAVSSGFEPDRSSWGWNWLERWMAVRPWENRFLDINTKDGGKVDEDDVMDGRNGIRPQFRSTNAKSIPPNIHPSVAGHKTGPSVSDGCDSSSTSKSAGLLETSNTQSVKPKSNTNVQNSVEETNSKSGFPRSQSNPKERKSQVDKQAKKRLSLPNNGVGSGAQTAKYPTRSNMKGTRSTQKPIRDKPKPKINEGGDVSLAKSVPQPTVV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1459 442 MobiDBLite consensus disorder prediction 65 84 - -
Tpr4g1459 442 MobiDBLite consensus disorder prediction 62 84 - -
Tpr4g1459 442 MobiDBLite consensus disorder prediction 290 442 - -
Tpr4g1459 442 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Tpr4g1459 442 MobiDBLite consensus disorder prediction 317 369 - -
Tpr4g1459 442 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Tpr4g1459 442 Coils Coil 39 59 - -
Tpr4g1459 442 Pfam IQ calmodulin-binding motif 99 118 IPR000048 GO:0005515
Tpr4g1459 442 SMART iq_5 96 118 IPR000048 GO:0005515
Tpr4g1459 442 SMART iq_5 119 140 IPR000048 GO:0005515
Tpr4g1459 442 PANTHER IQ-DOMAIN 5-RELATED 2 402 - -
Tpr4g1459 442 Gene3D - 98 139 - -
Tpr4g1459 442 MobiDBLite consensus disorder prediction 389 411 - -
Tpr4g1459 442 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
Tpr4g1459 442 MobiDBLite consensus disorder prediction 14 50 - -
Tpr4g1459 442 PANTHER IQ-DOMAIN 5-RELATED 2 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1459 Tpr-Chr4 14221647 14228990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1459 1 419 IQD Protein Family AT3G22190 54.225 1.39e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1459 - - lang:109325503 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1459 4 14221647 14228990 Tpr4g1459 4 14221647 14228990 ECH