Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1443 ATGTCCAAAACTATAGTTGATGAATGTCGTGGTGTTCTTCATGTCTATAGCGATGGTTCAATAGTTCGAAAGTTAAACCCAGCCTTTAACATCCCTGTTGAAGAAAACGGCACCGTTTTATGGAAAGATGTTGTTTTTGACTCAGCTAATAATCTTCAACTTCGGCTTTATAAGCCAGCTAATACAATAAACTCCAAGCTTCCAATTTTTTACTACATTCATGGTGGCGGATTTTGTATCGGCTCGCGGACATGGCCAAATTGTCAAAATTATTGCTTTAAGCTCGCTTTGGAGCTTCAAGTTGTGGTTGTTGCTCCTGATTATCGGCTTGCACCGGAGAATCGGCTACCGAGTGCAATTGAAGATGGTTTTATGGCTGTTAAGTGGCTTCAAGAAGAAGCTTTGAGTAGTACTGAGCCGGATCCTTGGTTGAGCCATGTGGCTGATTTTAGTCGGGTTTTTATTTCGGGTGACTCGGCTGGTGGTAATATAGCTCATGATTTGGCGGTTCGGCTTGGGTTTGGGTCGGCTGAGTTGGCGCCGGTTCGGGTTAGGGGTTATGTTTTGTTGGCGCCGTTTTTTGGTGGAACTGTTCGGACTAAGTCAGAAGCTGAAGGACCAAATGATGCTTTTCTCAATTTAGAACTTATTGACAGGTATTGGAGGCTTTCAATACCCATTGGGGAGAATACAGATCACCCACTTGTGAATCCATTTGGACCCCATAGTAAGAGTCTTGAGGAAATTGATCTTGACCCAATTCTAGTAGTGGTTGGAGAAAATGATTTGCTTAAAGACAGGGTAGAGGATTATGCAAGAAGGCTTAAGAATTGGGGTAAAAATATTGAGTATGTTGAATTTAAAGGACAACAACATGGGTTCTTTACTATTGATCCAAATTCTCAACCATCAAAAGAGTTGATGTTGATCATCAAACAATTCATTGAGAAGAATTAA 957 0.4127 MSKTIVDECRGVLHVYSDGSIVRKLNPAFNIPVEENGTVLWKDVVFDSANNLQLRLYKPANTINSKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLALELQVVVVAPDYRLAPENRLPSAIEDGFMAVKWLQEEALSSTEPDPWLSHVADFSRVFISGDSAGGNIAHDLAVRLGFGSAELAPVRVRGYVLLAPFFGGTVRTKSEAEGPNDAFLNLELIDRYWRLSIPIGENTDHPLVNPFGPHSKSLEEIDLDPILVVVGENDLLKDRVEDYARRLKNWGKNIEYVEFKGQQHGFFTIDPNSQPSKELMLIIKQFIEKN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1443 318 PANTHER ARYLACETAMIDE DEACETYLASE 3 316 - -
Tpr4g1443 318 Gene3D alpha/beta hydrolase 8 317 IPR029058 -
Tpr4g1443 318 Coils Coil 261 281 - -
Tpr4g1443 318 Pfam alpha/beta hydrolase fold 71 295 IPR013094 GO:0016787
Tpr4g1443 318 PANTHER CARBOXYLESTERASE 15-RELATED 3 316 - -
Tpr4g1443 318 SUPERFAMILY alpha/beta-Hydrolases 4 317 IPR029058 -
Tpr4g1443 318 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 153 165 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1443 Tpr-Chr4 14054971 14057180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1443 5 316 Carbohydrate Esterase AT5G16080 34.056 1.38e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1443 - - aprc:113858789 525.783