Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1441 ATGTTTAACGGTATGATGGATCCTGATTTGATCAGAATCGCTCAGGAACAGATGAGTCGTATGTCACCTGCTGATATGGCTCGGATCCAACAACAGATGATGTCTAATCCTGAGTTGATGAGGATGGCTTCAGAAAGCATGAAGAATATGAATACTGAAGATTTTAAACTTGCTGCTGAACAGTTAAAGCATACACGGCCTGAAGAAATGGCTGAGATTGGTCAAAAGATGGCTAATGCATCGCCTGATGAAGTAGCGGCTATGCGTGCTCATGCTGATGCTCAGATGAAATATCAATTGAATGCAGCTGAGATGTTGAAGAAGCAGGGAAATGAACTTCACAATCAAGGAAAGTTTGATGATGCTTTGCAGAAGTATAAGCTGGCTAAGGAAAACATTAAAGAGATTCCATCTTTTCAAAGTAGAAAGCTTCTTTTGGCGTGTTCACTTAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATGATGAGTGCATAAAAGAAGGTTCTGAGGTTTTGGTATATGATTCAAAGAACCTTAAGGCTCTTTATCGAAGGGGTCAAGCATATAAGGAACTAGGCCGTCTGCAGGATGCTGCTACTGATTTGAACAACGCACTTGAAGTGTCTCCTGGCGACGATACAATTGCGGAGCTTTTGCGGGACACCAAGGAACAGTTGACAAAGGAAGGTGGTGATTTTGCACCTAGAAAATTAGTAATTGAAGAAATAACTGAAGAAGTCGAGAATGTGCCTTCTGGAAACAACAGAAGCTCTTCTTTTGAACAAACAGTTGATCAACCACAAAAATCTAGTGGTTCCTCTAAGAGTAGCAGTCTAGCTAACAACGAAAATCCAAAATCAAAACCAGATAGTTTAGATACACTGAGAAAAGATCCAGAAGCCATCAGATCATTCCAAAACATCATTTCAAATGCCGATCCTGCCACCCTGGCTGCTTTGAACATTGGACAATCCAAAGACGTGTCTCCAGATATGATTAAAGCATCCACAGAAATGATCGGAAAGATGTCACCTGAGGAACTTCAGAAAATGCTTGACATGGCGTCTTCATTTCAAGGGGACAACCCGTTTTTAAGAGGAGGTTCCTCTGATTCTCCATTCAACCCTGGATCGATTCCTCCAAACTTGACACCTGATATGTTTAAAACAGCAAGTGACATGATAAGTAAAATGCCACCAGATGAACTTAAGAAGATGTTTGAAATGGCATCCGTACTGCAAGGGAAAGAATCTATTCCATCATCAGCAGCTGTAGACAAGAATGAAAGAAATGTTTCACAGTCAGATTTCCCATCCTCAAGCACCACTCATGCTTTTGGAGAATCAAGTTCTTCTCACAACGCGTTTTCAAATATTAGAAATTCTTCAGAGCCAAACTTCCCCTCCTCAAGCACTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGTTTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGAGAACAATTTGGTTTCAAGCTTTCACCAGAAGAGGCAGCAAAAGCTCAGCAAGCTATGTCATCCTTATCACCAGAGAACTTGGATAAAATGATGCTTTGGGCGGACAGGATTCAAAGAGGAGCTGAATGTGCAAAAAAGACAAAGAACTGGTTGCTAGGGAAACAAGGCTTTATCTTAGCAATATGCATGCTCATTTTGGCCATCATTCTTCACCGGTTAGGTTTCATTGGTAGCTAG 1761 0.4106 MFNGMMDPDLIRIAQEQMSRMSPADMARIQQQMMSNPELMRMASESMKNMNTEDFKLAAEQLKHTRPEEMAEIGQKMANASPDEVAAMRAHADAQMKYQLNAAEMLKKQGNELHNQGKFDDALQKYKLAKENIKEIPSFQSRKLLLACSLNLMSCYLKTRQYDECIKEGSEVLVYDSKNLKALYRRGQAYKELGRLQDAATDLNNALEVSPGDDTIAELLRDTKEQLTKEGGDFAPRKLVIEEITEEVENVPSGNNRSSSFEQTVDQPQKSSGSSKSSSLANNENPKSKPDSLDTLRKDPEAIRSFQNIISNADPATLAALNIGQSKDVSPDMIKASTEMIGKMSPEELQKMLDMASSFQGDNPFLRGGSSDSPFNPGSIPPNLTPDMFKTASDMISKMPPDELKKMFEMASVLQGKESIPSSAAVDKNERNVSQSDFPSSSTTHAFGESSSSHNAFSNIRNSSEPNFPSSSTDLQEQMRNQMKDPAMRQMFTSMFKNMSPEMMANMGEQFGFKLSPEEAAKAQQAMSSLSPENLDKMMLWADRIQRGAECAKKTKNWLLGKQGFILAICMLILAIILHRLGFIGS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1441 586 MobiDBLite consensus disorder prediction 421 477 - -
Tpr4g1441 586 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 586 - -
Tpr4g1441 586 MobiDBLite consensus disorder prediction 425 477 - -
Tpr4g1441 586 Gene3D Tetratricopeptide repeat domain 89 232 IPR011990 GO:0005515
Tpr4g1441 586 SMART tpr_5 180 213 IPR019734 GO:0005515
Tpr4g1441 586 SMART tpr_5 103 136 IPR019734 GO:0005515
Tpr4g1441 586 SMART tpr_5 146 179 IPR019734 GO:0005515
Tpr4g1441 586 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Tpr4g1441 586 MobiDBLite consensus disorder prediction 249 289 - -
Tpr4g1441 586 SUPERFAMILY TPR-like 96 227 IPR011990 GO:0005515
Tpr4g1441 586 PANTHER OUTER ENVELOPE PROTEIN 61 58 586 - -
Tpr4g1441 586 MobiDBLite consensus disorder prediction 249 295 - -
Tpr4g1441 586 Pfam Tetratricopeptide repeat 181 213 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1441 Tpr-Chr4 14039256 14045853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1441 93 227 Calmodulin-binding Proteins AT5G48570 33.333 2.90e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1441 - - cam:101514495 968.378