Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1433 ATGGATTCAGATCCAATTGATAACAACACAATTGTTCTTAACTCTTTCACTGAAGACATAAACAATCCCATGTTGACACATAGTCCCAAAAACAACATAGATGCTGTTGATACACAAAGTACAATCCCATTCCAATTAATCAACCTTAATTGCTCCAATGAAAACCAAACATCTCATGAAACATTGAAAGAGTTTGATTTCTTTAATGTTAATAATAACAATGATCATAATAAGGTTGTCTCTCTCTCTGCCTTTGCCCTTGACAATGATACCAACATACCATCTTTATTGAAAATCAAACTCAATACTGGCACCGGTGATCTTCTTAACCCCAATACTAGCGGTGATCAATCTATGGTGGATGATGGCATGTCACCTACTTCTGACAACAAGGATATTAAGAATGAGATGGCTATTCTTCAAGGTGAGCTTGATCGAGCAAACACGGAGAATCGTCGATTGAAGCTAATACTTGATCAACTTCAAACAGATTACGATACCCTGCGTATGCATTTCAATAAAGTGATGCATTACCGTATGGTTGATGAAAAGTCTAAAGAGAAAGACAGAATTGAGAATGGTAAAGTTTTGGTTCCAGGTCAAATTATTGATTTCGAGTTGGCTCCTAATGCTGAGACCGAGATGGATCTTGATCCCTCCTCTTCATCAATTGGAAGAAAAAGAAGTCGCGATGAATTAGGATTGCTGACAAATAACACCGGTGTTGCTTCCCGTGAATTAGTCCTAGAAAAGAACATTAATGTTAGTGATGAAAAGAAGGAACTTGGTAAAGGGATTGAAAATGAAGATAGTCCCATAGGTAATGCTGACAAAACTCAAAGTTTGAATCCTTCAAACAATTTTAGTAGTATTCATCAAGTTGAGGATGCATTGGGGAAAGCAAGAGTTTCTGTTAGAGCTAGATCAGAAGAAGACATGGTTCCAGATGGAGGCCACTGGAGAAAGTATGGTCAAAAAATGGCGAAAGGAAACCCATGTGCTCGATCTTATTATCGATGCAGCATGGCTGCTGGCTGCCCGGTTAGAAAACAGATACAAAGGAGTCCTCAAGACACAACAATTGTAATCACAACATATGAAGGGTATCACAACCACTCTTTACCTCCAAAAGCCGCGGAAATGGCACAAAGAACTTCATCAGCTGCAAAAATGTTTCTTACAGGATCAACATCAAGCAAAGATGGAAAAATGAATGTAGATTTCGTTAAAAAAACACTTCATCCAGAATCTTCAAGTTCTCCAACTATCTCAACAAATTCTCTTTTGCCAATTGTTACAATTGACTACACTAAACCTTCGAGTAGTCATCCCTCAAGGCGTCAAAATCATCAGCAAATTCCTGGAAACCCTTATAATTTTTCAAGCTCCTCATCTTCTAAAATTCCTCAAGACCAATCAAAGTTGTCTGGTCTTTATATGTCACCAAATTCAACAAACCTTTCTGAAATTGTAGTCCCGAATGTTACACAAGCATTTAGTGATGCCATGGCTGCTGATCCAAATTTCACTGCTGCTTTGGCTGCTCTTATTACTTCGATTATGCGTACTTCTCAGTCAACCGGCAATGCTACTACTAGTAGTACTACTACTAGTACTGCTGCTGCTACCGATGGAACAGGAAACAACAATGCAAATCTCGCAAGTAGCGACAATAATAATGGGAAGGAGTAG 1692 0.3848 MDSDPIDNNTIVLNSFTEDINNPMLTHSPKNNIDAVDTQSTIPFQLINLNCSNENQTSHETLKEFDFFNVNNNNDHNKVVSLSAFALDNDTNIPSLLKIKLNTGTGDLLNPNTSGDQSMVDDGMSPTSDNKDIKNEMAILQGELDRANTENRRLKLILDQLQTDYDTLRMHFNKVMHYRMVDEKSKEKDRIENGKVLVPGQIIDFELAPNAETEMDLDPSSSSIGRKRSRDELGLLTNNTGVASRELVLEKNINVSDEKKELGKGIENEDSPIGNADKTQSLNPSNNFSSIHQVEDALGKARVSVRARSEEDMVPDGGHWRKYGQKMAKGNPCARSYYRCSMAAGCPVRKQIQRSPQDTTIVITTYEGYHNHSLPPKAAEMAQRTSSAAKMFLTGSTSSKDGKMNVDFVKKTLHPESSSSPTISTNSLLPIVTIDYTKPSSSHPSRRQNHQQIPGNPYNFSSSSSSKIPQDQSKLSGLYMSPNSTNLSEIVVPNVTQAFSDAMAADPNFTAALAALITSIMRTSQSTGNATTSSTTTSTAAATDGTGNNNANLASSDNNNGKE* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1433 563 Coils Coil 130 164 - -
Tpr4g1433 563 Gene3D WRKY domain 299 376 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g1433 563 ProSiteProfiles WRKY domain profile. 309 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g1433 563 PANTHER OS05G0567200 PROTEIN 39 544 - -
Tpr4g1433 563 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 544 IPR044810 GO:0003700
Tpr4g1433 563 SUPERFAMILY WRKY DNA-binding domain 307 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g1433 563 SMART WRKY_cls 314 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g1433 563 Pfam WRKY DNA -binding domain 316 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g1433 563 MobiDBLite consensus disorder prediction 524 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1433 Tpr-Chr4 13960067 13963221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1433 98 521 WRKY Transcription Factor Family AT1G62300 37.916 1.35e-74 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g1433 WRKY 3.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1433 - - gsj:114417328 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1433 4 13960067 13963221 Tpr4g1433 4 13960067 13963221 ECH
Tpr4g1433 4 13960067 13963221 Tpr7g2641 7 33612339 33615385 ECH
Tpr4g1433 4 13960067 13963221 Tpr2g3138 2 35374387 35377231 ECH