Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1432 ATGGAGTGGAAGAGAGGCCACATCATAGGATATGGCTCAACCGCCACCGTCTCCCTTGCCACACTTAACGGCGACATATGTGCCGTGAAGTCATCGGAGCTTTCATGTTGTGAGCCACTAAAGAGAGAGCAAAATATTCTATCTTCTCTATGTTATCCTAATCCTTATGTTGTTACTTATAAAGGTTATGACATTACCATGGAGAACAATAAGCTCATGTACAATATATTCATGGAGTACATGCCATTTGGCACGCTTAGTCAGCACGGTGGACTGCTCAATGAGCATACCATCGTGTGCTATACAAGGCAAATATTAAAAGGGTTAGATTATTTGCATTCAAAAGGGTTGGTGCATTGTGACATTAAGGGCGCGAACATCTTGATTGGAGAAGATGGAGCCAAAATTGGAGACCTTGGTTGCGCTAAGAGTATAAATGAAGCCGCGGCGCCAATCCGTGGCACCCCAATTTTTATGGCGCCGGAGGTAGCACGCGGTGAAGAACAAGGATATCCTAGTGATATTTGGTCACTTGGTTGCACTATGATTGAAATGGCAACTGGTTCTTCACCATGGCCTAATGTAGATGACCCAATTTCAACACTTTATCATATAGCATATTCAAATTATGGTCCTAAAATTCCATGTTTTTTATCTCATCAAGCAAAGGACTTTATAGAAAAATGCTTAAGAAGGAATCCAAAAGAGAGGTTTTCAGCTAGTCAACTTTTGAGTCATCCATTTCTTAAAGAGTTATGTTCCAATTCTAAGCAAGTTGTGGAATCTAATTCAATTTCACCAACTAGTATTCTTGAACAAGGCTTTTGGTGTTCTATGGAAGAATCACAAAGCCTTAAGTTAGAGAATTCTATTGTTGATGATAGGATCAAAAGATTAGCTGGGGAACCTTGTTTAGCAAGGTGGCATGATAATCATGATGATAATTGGATCACAATTAGAGAAAATGAAGTTGATGTTTTTTGCAATTGTGGGTTAGAGATAGGTTCATCTAATGATGAGTTGGTGAAAAGTAATGTGAAAGATGGAATTAGTGGGAAATTTTGTAAGGGTCAAAGTCACATTTGTAGGGATGGTAGTTTTGTTGGTAGTAGTGATAATAATTTTCAACTAGGTATTGTTAAGATGATAGTTCCATCATTATTAGATGTTTTATAA 1176 0.3827 MEWKRGHIIGYGSTATVSLATLNGDICAVKSSELSCCEPLKREQNILSSLCYPNPYVVTYKGYDITMENNKLMYNIFMEYMPFGTLSQHGGLLNEHTIVCYTRQILKGLDYLHSKGLVHCDIKGANILIGEDGAKIGDLGCAKSINEAAAPIRGTPIFMAPEVARGEEQGYPSDIWSLGCTMIEMATGSSPWPNVDDPISTLYHIAYSNYGPKIPCFLSHQAKDFIEKCLRRNPKERFSASQLLSHPFLKELCSNSKQVVESNSISPTSILEQGFWCSMEESQSLKLENSIVDDRIKRLAGEPCLARWHDNHDDNWITIRENEVDVFCNCGLEIGSSNDELVKSNVKDGISGKFCKGQSHICRDGSFVGSSDNNFQLGIVKMIVPSLLDVL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1432 391 Gene3D Transferase(Phosphotransferase) domain 1 2 306 - -
Tpr4g1432 391 SMART serkin_6 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1432 391 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Tpr4g1432 391 Pfam Protein kinase domain 5 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1432 391 SUPERFAMILY Protein kinase-like (PK-like) 3 258 IPR011009 -
Tpr4g1432 391 ProSiteProfiles Protein kinase domain profile. 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1432 391 CDD STKc_MAPKKK 2 249 - -
Tpr4g1432 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Tpr4g1432 391 PANTHER MAP KINASE KINASE KINASE 1 337 - -
Tpr4g1432 391 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1432 Tpr-Chr4 13954401 13955670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1432 3 320 MAP Kinase Kinase Kinase AT5G55090 48.837 9.70e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr4g1432 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1432 K20716 - gmx:100794648 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1432 4 13954401 13955670 Tpr4g1432 4 13954401 13955670 ECH
Tpr4g1432 4 13954401 13955670 Tpr2g3141 2 35392039 35393640 ECH