Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1421 ATGAGTGTGATTAAATCAGCCATAGGAGATGCAATTTTAACATCAATCTTTGTTTTCTTCATCTCAACATTAAAAATTCTCTCTACAAAAACATCATTTTTCCTTAATCTTGAACCAGTTTCACTACCTGGTTTATTCATCACAACAATCCTAAACACAATAATCATCCTCACAATAAGCCTTATTGGAAGAATCTTAGGTGGAGCTAGCTTCAACCCATCATCAACAATTTCCTTCTACACATTAGGACTAAGACCCAATTCATCTCTTCTATCAATGGCCATTAGATTTCCAGCTCAAGCAATAGGCGGCGCGTTCGGTATCAAAACAATTCTTCAAGTTATGCCAAATGAATACAAACATATGATGAAAGGTCCTTCTTTGAAAGTTGATTTACATACAGGAGCTATAGTTGAAGGTGTTTTAACATTTACTCATAACTTTGTTATTCTTATTGTTATGCTTAAGGGTCCTAAAAATCCTTGGTTAAAGGTTTATTTGCTTTCTGTTGCAACTTTGGTTTTGGTTATTATTGGTTCTGGCTATACAGGACCTTCTATGAACCCTGCTAATGCATTTGGTTGGGCTTATATGAATAATAAGCATAATACTTGGGAGCAATTTTATGTTTTTTGGATTTGTCCTTTAATTGGGGCTAGTTCTGCTGCTTTGGTTTATCGTTTTGTGTTTATGTCAGCAGAACTAGCCCCAGTTAAGGAGAAGAAAGCTTGA 732 0.3511 MSVIKSAIGDAILTSIFVFFISTLKILSTKTSFFLNLEPVSLPGLFITTILNTIIILTISLIGRILGGASFNPSSTISFYTLGLRPNSSLLSMAIRFPAQAIGGAFGIKTILQVMPNEYKHMMKGPSLKVDLHTGAIVEGVLTFTHNFVILIVMLKGPKNPWLKVYLLSVATLVLVIIGSGYTGPSMNPANAFGWAYMNNKHNTWEQFYVFWICPLIGASSAALVYRFVFMSAELAPVKEKKA* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1421 243 Gene3D Glycerol uptake facilitator protein. 1 242 IPR023271 -
Tpr4g1421 243 PANTHER AQUAPORIN SIP1-1 1 243 IPR044222 GO:0015250
Tpr4g1421 243 SUPERFAMILY Aquaporin-like 2 234 IPR023271 -
Tpr4g1421 243 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1421 243 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1421 243 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1421 243 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1421 243 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1421 243 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1421 243 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1421 Tpr-Chr4 13871448 13872714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1421 1 230 Major Intrinsic Protein MIP AT3G04090 45.652 9.47e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1421 K09875 - gmx:100797126 333.569