Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1394 ATGAAAATGGGAAGCCAAAGTTGCTTTAAGGTTTTGATTATTTGTCTTATAGCAATAATTGGAGCAGCTAATGCTCAGTTGCAGCTTGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAGAAAATTGTTTTGAAGTATGTTCATAAACATATTCCAAATGCACCATCACTAGCAGCTGCACTCATAAGACTACATTTCCATGATTGTTTTGTTAGGGGATGTGATGCATCTGTTCTTTTGAACGCAACACAAAGCAATCCTCAAGCCGAAAAGAACTCTTTTCCAAATCTTACACTTAGAGGATTTGAATTCATTGACAAAATAAAGAGTCTTATTGAAGCTGAATGCCCCGGTGTTGTCTCTTGTGCTGATATATTGACTTTGAGTGCTAGAGACTCTATTCATGCCGTCGGTGGACCTTTTTGGAATGTACCAACTGGTCGAAGGGATGGGGTTAGATCTAAAGCAGCAGATGTTTTTCTTGGCCTTCCAGCTCCATTTCACAACGTCTCCACTCTCCTAACACTCTTTGGCAATGTTGGACTTGATGCAAATGACTTGGTCTTGCTTTCTGGTGCACACACAATTGGTATTTCACATTGTGCATCAGTATCAAACAGGTTATATAATTTTACTGGCAAACTTGATCAAGACCCAGATCTAGACAGTGCATATGCTAAAAATTTGAAAACCTTCAAGTGTAAGAGTATCAGTGATCAAACCACAGTTCTCGAAATGGATCCCGGAAGTCGCAATACATTTGATCTTGGCTATTACAAGCAAGTTGTTAAGAGAAGAGGTTTGTTTGAATCAGATGCTGCATTGCTTAAAAGCTCTACAACAAGATCTATTGTTGCACAACATCTTCAATCAACTAAAAAATTCTTTGTTGAATTTGCTAAGTCTATGGAGAAAATGGGAAGAATTAATGTTAAGGTTGGAACTGAAGGAGAGATTAGGAAGCATTGTGCATTTGTTAATTAA 984 0.3801 MKMGSQSCFKVLIICLIAIIGAANAQLQLGFYAKSCPKAEKIVLKYVHKHIPNAPSLAAALIRLHFHDCFVRGCDASVLLNATQSNPQAEKNSFPNLTLRGFEFIDKIKSLIEAECPGVVSCADILTLSARDSIHAVGGPFWNVPTGRRDGVRSKAADVFLGLPAPFHNVSTLLTLFGNVGLDANDLVLLSGAHTIGISHCASVSNRLYNFTGKLDQDPDLDSAYAKNLKTFKCKSISDQTTVLEMDPGSRNTFDLGYYKQVVKRRGLFESDAALLKSSTTRSIVAQHLQSTKKFFVEFAKSMEKMGRINVKVGTEGEIRKHCAFVN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1394 327 ProSiteProfiles Plant heme peroxidase family profile. 26 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PANTHER PEROXIDASE 5 326 - -
Tpr4g1394 327 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Tpr4g1394 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Tpr4g1394 327 PANTHER PEROXIDASE 25-RELATED 5 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 Gene3D - 30 327 - -
Tpr4g1394 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tpr4g1394 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 Gene3D Peroxidase, domain 2 164 306 - -
Tpr4g1394 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1394 327 Pfam Peroxidase 47 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1394 Tpr-Chr4 13543943 13546794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1394 11 327 Peroxidase AT4G11290 63.522 1.78e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1394 K00430 - gmx:100785662 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1394 4 13543943 13546794 Tpr4g1394 4 13543943 13546794 ECH