Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1382 ATGGAAGTGACAAGAATCCGCGGTTGTGCGGTTGTTTATGTCATCCTCCTTTGTGCTTTGGCTCAAGGGGGCTCAGAGGGGAAGAAGGAAGATGAACTTTATAATGATGATCATCAAATTTTTTCATTTTTCAATAACATTCATGGAAAACAGGAAGAGAAAGTGTGGAAACATTGCATTAAACAATTGATAGAGAAGAACAATGATGTAGAAGAAAGCAGTGACTTGCGGTCTATTCTTTCGACAGAAAACAATATTCACAAAGCAACAGAATCATTACCTCTCCATATGAGAAAAAAAGTTATGGATTGCATAAGAACAAGTGCTACTCCTCCTGCTCCTATTTCTGAAGTAAAAATTACTTCAAGATACTTGATAAGAGAACGTTCTAAACCAACCTTAGTGTCAAGAAACGATCATCCTCATTTGATAACAAGTTCGATTTCTGAATCACGACAAAATCACATATCACCAAGTCCTAGTACTAAAATGGTAGCAGAAATTCATGTTTCAACACCAGCAAGTGCTTCTTTGTCTTCACCATCACCGACACCAGCAAGTGCTTCTTCACCTTCACCGACACCAACACATGAGCATGAATTTGAATATTTACCATTTACTCCAGATAGTGTTGCGTCGTCTCCACCTCCACCGAGTAAATCTAGTGATCCTTCTCGTAAATTAAAACCTAAAACAGATGCTCCAACTTCTCCACCTTCTTCTAATAATGACTCAACAATGAAGGATACAATTATTTTAGCTGTTGTTATCTCAGGAATCATAATCTTTATTGGATTATCCCTTTGCTATCGCGAGGCCAACAAAGATGACGGACCTTTGCTCGTATTAACCTCGGGCGATTATTCTGGAGGTACACCGAGGGTTGTTCGATTGGGAAGTATTAATAATAAAGAAGAATGTGATATTAACAAAGGATGTCCTTTTAATAAAGGAAGGAATACATCTAATGTTAAAAGTTTGTCCATTAAGGCCGAAAATAATAACGATTCTTCACTAGTCGAAAAAATAACTACAGCAACAGAAACAGCAGCAGAAACAACAACTACAACAACAACAACAACAACATCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGAAGATATGAGACAACAAGTAACAGAAACTTCTTCTGAAAAACCAGCCCCTTCACCTCCTGGTCCTCTGCCGCCGCCTCCTGGTCCTCTTCCGCCGCCTCCTGGTTTTCTGCCGACTCCTGGTCTTCCGAAACCTCCTCCACCACAGCCACCTCCTCTTGCTTCTCGTCCTCCACCACCTCCAAGAGCTGGCCATCCACCACCTGCTCCTCCTCCCAAACCAATGGCTGGTAAAAACAAAGGTATACCTCTTGCACAAGCAAAAGAAGTAAGTTCTGAAGGTGATGCTCAAAAGCCTAAACTAAAGCCATTTTTCTGGGAGAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCGTTTGTGTTCGATGAAGAAATGATGGAGTCATTATTCGGATTCACAAACCAGAACAAAAACGAACGGAGAAAAGATTCAGCTTCTGCGGATACTTCAGTACAGTATATTCAGATTATTGACCCTAGGAAAGCACAAAATTTATCAATTCTTTTACGTGCTTTGAATGTGACAACAGTAGAAGTTGTTGATGCACTTAACGAAGGTAATGAGATTCCTTTGGAGCTTATCCAAACATTGTTGAAGATGGCACCAACACAAGAAGAAGAACTGAAACTTAGGTTATTTTCTGGAGAACTAACTCAATTAGGCCCGGCAGAGAGGTTTCTCAAAGTATTGGTTGAAATTCCATTTGCTTTCCAACGTCTTGAATGTCTCATGTTCATGCTTATTCTTCGAGAAGAGGTTTCAAGCATTAAGGATTCCTTCGCAACATTAGAGGTTGCTTGCGACAAGTTGAGAAAAAGCAGATTATTCTTAAAACTACTAGAAGCAGTACTCAAAACCGGCAATCGTATGAATGATGGTACCTACCGGGGGGGCGCTCAAGCATTTAGGCTCGACACACTTTTAAAACTTTCTGACGTAAAAGGAACAGACGGAAAAACAACATTGTTACATTTTGTGGTTCAAGAAATTATACGTTCTGAAGGAATAAGAGTAGTAAGAACTGAAAGAGCAAGCAGAAGCATTTCAAGCGTAGGAACCGATGATGTAGAATATGAAAACGAAAATTCAGAAGAACATTATCGTAGTCTTGGACTTCAAGTAGTTTCAAGCTTAAACAGTGAACTCGAAGATGTTAGAAAAGCAGCATTAATAGACGGTGATGCATTGACCAGCACAGTTTTGAAACTCGGTCACTCGTTGGTTAAGACTCAGGAGTTTATGAACAATGAGCTTAAGAATTTGGAAGGGACTGAGTTTCAAAGTTGTTTAGAGAAGTTTATGGATCATGCGAAAGGAGAGGTGATGTTTCTTGTTGAAGAAGAAAAAAGAATAATGGCATTAGTTAAGAGTACGGCGGATTATTTTCATGGGAATGCAGGGAAAGATGAAGGGTTGCGCCTGTTTACGATTGTGCGTGATTTCTTGTTCATATTAGATAAGGTTTGTAAGGAGGTTAAGGAAGCTGCATTAAAGGCGATGAAGGATTCCGCTAAGAAAGAGTCTTTGTCAGCGTCGGTGCCATCTTCACCGAGTGCCAAAAATCATCAATCGTCGCCATCACAGCAACCGACGTCAGCTTCTGATCTACATAGGCGACTGTTTCCAGCTATTGCAGAGCGGAGAGTGGATTATTCTAGCTCTGATGACGACGACGATGATGAGTTTTAG 2838 0.4059 MEVTRIRGCAVVYVILLCALAQGGSEGKKEDELYNDDHQIFSFFNNIHGKQEEKVWKHCIKQLIEKNNDVEESSDLRSILSTENNIHKATESLPLHMRKKVMDCIRTSATPPAPISEVKITSRYLIRERSKPTLVSRNDHPHLITSSISESRQNHISPSPSTKMVAEIHVSTPASASLSSPSPTPASASSPSPTPTHEHEFEYLPFTPDSVASSPPPPSKSSDPSRKLKPKTDAPTSPPSSNNDSTMKDTIILAVVISGIIIFIGLSLCYREANKDDGPLLVLTSGDYSGGTPRVVRLGSINNKEECDINKGCPFNKGRNTSNVKSLSIKAENNNDSSLVEKITTATETAAETTTTTTTTTTSTAAAAAAAAAATEDMRQQVTETSSEKPAPSPPGPLPPPPGPLPPPPGFLPTPGLPKPPPPQPPPLASRPPPPPRAGHPPPAPPPKPMAGKNKGIPLAQAKEVSSEGDAQKPKLKPFFWEKVNAKPDQSMVWHEINAGSFVFDEEMMESLFGFTNQNKNERRKDSASADTSVQYIQIIDPRKAQNLSILLRALNVTTVEVVDALNEGNEIPLELIQTLLKMAPTQEEELKLRLFSGELTQLGPAERFLKVLVEIPFAFQRLECLMFMLILREEVSSIKDSFATLEVACDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRVVRTERASRSISSVGTDDVEYENENSEEHYRSLGLQVVSSLNSELEDVRKAALIDGDALTSTVLKLGHSLVKTQEFMNNELKNLEGTEFQSCLEKFMDHAKGEVMFLVEEEKRIMALVKSTADYFHGNAGKDEGLRLFTIVRDFLFILDKVCKEVKEAALKAMKDSAKKESLSASVPSSPSAKNHQSSPSQQPTSASDLHRRLFPAIAERRVDYSSSDDDDDDEF* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1382 945 MobiDBLite consensus disorder prediction 139 196 - -
Tpr4g1382 945 ProSiteProfiles Formin homology-2 (FH2) domain profile. 466 894 IPR015425 -
Tpr4g1382 945 MobiDBLite consensus disorder prediction 421 444 - -
Tpr4g1382 945 Pfam Formin Homology 2 Domain 470 866 IPR015425 -
Tpr4g1382 945 MobiDBLite consensus disorder prediction 131 243 - -
Tpr4g1382 945 MobiDBLite consensus disorder prediction 346 398 - -
Tpr4g1382 945 MobiDBLite consensus disorder prediction 888 920 - -
Tpr4g1382 945 Gene3D Formin, FH2 domain 475 904 IPR042201 -
Tpr4g1382 945 PANTHER FORMIN-RELATED 368 942 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr4g1382 945 PANTHER FORMIN-RELATED 7 357 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr4g1382 945 SUPERFAMILY Formin homology 2 domain (FH2 domain) 535 889 - -
Tpr4g1382 945 MobiDBLite consensus disorder prediction 891 918 - -
Tpr4g1382 945 MobiDBLite consensus disorder prediction 346 368 - -
Tpr4g1382 945 SMART it6_source 466 883 IPR015425 -
Tpr4g1382 945 PANTHER FORMIN-LIKE PROTEIN 7 357 - -
Tpr4g1382 945 PANTHER FORMIN-LIKE PROTEIN 368 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1382 Tpr-Chr4 13376838 13382443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1382 470 933 FH2 protein (formin) Gene Family AT5G54650 63.462 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1382 - - gmx:100780844 703.36