Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1374 ATGTTGTCTATTTTCTGTTTCTGCTTAATACTTTTCACTTCTTTTAACCATTGTTTAGCTAGAGATACCATAACCATAAACAACTTACTAAGAGATGAAGAAAAACATACTCTCATTTCAGCAGGAGAAAATTTTGAACTTGGATTTTTCACTCCAAATGAAACCTCTTTAGGTTATAGAAAAAGATATGTTGGAATTTGGTACTACAATTTAACACCAAAAACAGTTGTTTGGGTTGCAAATAGAGACAACCCAGTTCAAGATTCTAGTGGCACTTTTGTCATTTCACAAAATGGAAATCTCATGGTTTTAGATAGTACTGGTAAATCTTACTGGAGTACAAATCTTGAAACATCATTATCATCTTCATTACATAGGAAAGTTAAACTATTAGACAATGGAAACCTTATTGTAATCGACGAAGAACAAGAACAAGGAAAAGTGAAGATTCTATGGCAGAGTTTTGAGAATCCAACTGATACATTTCTTCCAGGAATGAAAATGGATGAAAGTTTATCATTAACTTCATGGAGAAGTAATGAAGAACCTGCATCAGGAAACTTTACTTTCGCACAAGACGAAAAAGAGAATCAATATATTATATGGAAAAGATCTATTAGGTATTGGAAAAGTAGTGTATCAGGTAAATTTGTTGGAACCGGTGAAATGTCTTCAGCTATATCTTATCTTTTATCAAATTTCACTTTGAAAATTTCACCAAATAACACTGTTCCTTTTCTTACTCCATCACTTTATAGTAACACAAGGTTTGTTATGACTTATTGGGGTCAACTTAAGTATTTGAAGATGGATTCAGAGAAAAAATGGTTGATGGTTTGGGTTGAACCAAGAGATAGATGCAGTGTTTTCAATGTATGTGGAAATTTTGGTAGCTGTAATAGTAAATATGATTCTATGTGTAAGTGTTTACCTGGATTTAAGGCGAATTCTATCGAAAAATGGAAAGGTGGAGATTTTTCGGGTGGATGTAGTAGGAAAACAAATGTGTGTGGTGAGAATGCTAAGAGTGATACATTTTTGAAGTTACGAATGATGAAAGTTGCGAATCCTGATGCTGAGTTTAATGCTAAGAGTGAAGAGGAATGTAAGTTGGAGTGTGTTAATAATTGTCAGTGTTATGCTTATTCATATGTAGATGTTGAAAAGGTTGCAAGGATTGGTGATAGTGGTGATCCTGTTTGTTGGATTTGGTATGAGGATTTGGATAATCTTGAAGAAGAGTATGAGGGTGGTTGTGATCTGAATGTTAGAGTTGCATTTTCTGATATAGAATCCACTAGCAGAAGTTGTGGAACTTGTGGCACAAACTTCATTCCATATCCCCTTAGCACAGGACAGCATTGTGGTGACCCCAAATACTTCAATTTTCAATGCAACACTACAACTGGTGAGCTTGAATTTGATACTCCTGGAGGAGCGTATCAAGTCATAAGTATAAATCAAGAAACACAAAAATTCTTGATCCATCAAAATAATGTACTTAATTGTAAGAGTCAAAATTCTCTGCTTCTCAATAAGTCATCTCCATTTCATCTTACTGGAAATTGCTATGTTGATCCAATCACATTTAGTTCTAATGCTCCACTAACACATGGAGTAGAAATAGAATTAAGATGGGATTCTCCACTAGAGCCAATTTGTTCTTCATTGTTGGACTGCAAGGACTGGCCAAACTCGACTTGCAATACTACCGATGATGGAAAGAAGAGATGTCTTTGCAATAACAACTTTCTTTGGGATGGCTTCAAACTAAATTGTACTCGAGAAGGCGAAAGCTACAAAACAAAACGGCATCTATCTTCACCAGTGATCATTGTACTGACATTAGCACCTGTGATTCTCTTAATTATTTTGTCAAGTACGGTTGCATGTACTTATGTGCGAAAAAGGAGACAGTCCAAGACACAAGAAACCAAAGGATATATTCAAAAACACTCAGGGATCAACTTGTATGACAGTGAGAGATATGTTAGGGACTTGATTGAATCAGGTGGAATGAAAGAAGACGATGGACAAGCCGTAGATATTCCGCATTTTCACCTTGAGAGTATACTTGATGCTACTAACAACTTTGCAAGTGCAAACAAGCTTGGACAAGGTGGTTTTGGTCCTGTCTACAAGGTAAGTAACAATTTTTTTAGGCTGATAATTTTCATTTTCAACTTCATGGTGATATACTATAGTGATCGAAAAATGGACAATATTTTGGAACACTTTCAGGGGAAATTTCAAGGAGGACAAGAAATAGCGGTAAAAAGACTTTCAAGTTGTTCTGGACAAGGTTTTGAGGAGTTTAAGAATGAAGTTGTATTGATCGCCAAGCTTCAACATCGAAACCTAGTTCGACTTTTAGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTATATGAATATATGCCAAATAGAAGCTTAGATGGTTTCATTTTTGACAAAAAGCTGTCTGTTTTATTAGATTGGGATATGCGATTCAAGATTATTTTGGGGATTGCTCGAGGTCTTCTTTATTTGCATGAAGATTCTAGACTAAGAATTATTCATAGAGATTTGAAAGCAAGCAACATTCTTCTAGATGAAGAGAAGAATCCTAAAATCTCTGACTTTGGTTTAGCCAGGATATTTGGAGGAAAAGATACGGTAGCAAACACAGAAAGAGTGGTTGGAACATACGGTTACATGTCTCCAGAGTATGCACTTGATGGACATTTTTCGGTGAAATCTGATGTTTTCAGCTTTGGTGTTGTGGTACTTGAGATTATTAGTGGAAAAAGAAACACTGGATTTTATCAAGTAGAACATGAATTGAGCCTTCTAGGATATGCATGGCATTTGTGGAAAGTAGGGAGGGCATTAGATTTCATGGACCAAACACTATGTGAATCATGCAAAGCAGAAGAATGTTTGAAATGTGTGAATATAGGATTACTATGCTTACAAGAAGACCCAAATGAACGTCCAAACATGTCAAATGTTGTTTTTATGTTGGGAAGTGAATCTAATACTCTTCCAACTCCTAAGGAACCAGCCTTTGTCATTAGAAGATGTCCTTCAAGCAGAGCATCTACATCTAGTAAAATGGAAACTTTTTCACGTAATGAATTGACTGTCACTTTGGAAAATGGAAGGTAG 3150 0.3549 MLSIFCFCLILFTSFNHCLARDTITINNLLRDEEKHTLISAGENFELGFFTPNETSLGYRKRYVGIWYYNLTPKTVVWVANRDNPVQDSSGTFVISQNGNLMVLDSTGKSYWSTNLETSLSSSLHRKVKLLDNGNLIVIDEEQEQGKVKILWQSFENPTDTFLPGMKMDESLSLTSWRSNEEPASGNFTFAQDEKENQYIIWKRSIRYWKSSVSGKFVGTGEMSSAISYLLSNFTLKISPNNTVPFLTPSLYSNTRFVMTYWGQLKYLKMDSEKKWLMVWVEPRDRCSVFNVCGNFGSCNSKYDSMCKCLPGFKANSIEKWKGGDFSGGCSRKTNVCGENAKSDTFLKLRMMKVANPDAEFNAKSEEECKLECVNNCQCYAYSYVDVEKVARIGDSGDPVCWIWYEDLDNLEEEYEGGCDLNVRVAFSDIESTSRSCGTCGTNFIPYPLSTGQHCGDPKYFNFQCNTTTGELEFDTPGGAYQVISINQETQKFLIHQNNVLNCKSQNSLLLNKSSPFHLTGNCYVDPITFSSNAPLTHGVEIELRWDSPLEPICSSLLDCKDWPNSTCNTTDDGKKRCLCNNNFLWDGFKLNCTREGESYKTKRHLSSPVIIVLTLAPVILLIILSSTVACTYVRKRRQSKTQETKGYIQKHSGINLYDSERYVRDLIESGGMKEDDGQAVDIPHFHLESILDATNNFASANKLGQGGFGPVYKVSNNFFRLIIFIFNFMVIYYSDRKMDNILEHFQGKFQGGQEIAVKRLSSCSGQGFEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDGFIFDKKLSVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDLKASNILLDEEKNPKISDFGLARIFGGKDTVANTERVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQVEHELSLLGYAWHLWKVGRALDFMDQTLCESCKAEECLKCVNIGLLCLQEDPNERPNMSNVVFMLGSESNTLPTPKEPAFVIRRCPSSRASTSSKMETFSRNELTVTLENGR* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1374 1049 ProSiteProfiles Protein kinase domain profile. 698 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1374 1049 SMART ntp_6 341 425 IPR003609 -
Tpr4g1374 1049 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Tpr4g1374 1049 Pfam Protein tyrosine and serine/threonine kinase 748 1000 IPR001245 GO:0004672|GO:0006468
Tpr4g1374 1049 Gene3D Phosphorylase Kinase; domain 1 734 806 - -
Tpr4g1374 1049 Gene3D Transferase(Phosphotransferase) domain 1 807 1012 - -
Tpr4g1374 1049 SMART serkin_6 698 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1374 1049 Gene3D - 17 156 IPR036426 -
Tpr4g1374 1049 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 1046 - -
Tpr4g1374 1049 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 17 1046 - -
Tpr4g1374 1049 ProSiteProfiles Bulb-type lectin domain profile. 21 151 IPR001480 -
Tpr4g1374 1049 Gene3D Phosphorylase Kinase; domain 1 668 723 - -
Tpr4g1374 1049 Pfam S-locus glycoprotein domain 214 316 IPR000858 GO:0048544
Tpr4g1374 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Tpr4g1374 1049 SUPERFAMILY Protein kinase-like (PK-like) 681 1034 IPR011009 -
Tpr4g1374 1049 CDD STKc_IRAK 704 1002 - -
Tpr4g1374 1049 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Tpr4g1374 1049 Pfam PAN-like domain 340 410 IPR003609 -
Tpr4g1374 1049 CDD B_lectin 27 158 IPR001480 -
Tpr4g1374 1049 Pfam D-mannose binding lectin 75 170 IPR001480 -
Tpr4g1374 1049 SMART blect_4 27 158 IPR001480 -
Tpr4g1374 1049 CDD PAN_AP_plant 337 426 - -
Tpr4g1374 1049 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 180 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1374 Tpr-Chr4 13285470 13290468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1374 677 1020 Receptor kinase-like Gene Family AT4G23230 53.468 1.35e-118 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g1374 PK_Tyr_Ser-Thr 5.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1374 - - gmx:100775297 1632.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1374 4 13285470 13290468 Tpr4g1374 4 13285470 13290468 ECH