Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1372 ATGTCCAGTAACATGGGAACTGTTTATCTCTTCTTCAACCTGTATACTTCTTGGGTACTACTAATATGCTCTTCCCACCTGTGTTTAGCAGGAGATACTTTGAAGACAGGCCAGCAGATAATAGACAATGAAAATGATGCCATTCTTGTTTCAGCTGGAAAAATATTTGATCTAGGCTTTTTTACTCCAAGCATGACTGGAGGTACACAGAGATACTTAGGAATATGGTATCATATAAATCACACTGACAGGTCAGAACAATCTCAAAAACAAACAGTTGTGTGGGTTGCAAACAGAGACAAACCTATAGCTTTAAATTCATCTGGAGTTTTCCAAATAGCAGAAGATAGAAATCTTGTTGTTGTAGACACATCTGGTAAAAATATAACATACTGGTCATCCAGTATCTCTTCTAATTCTTCACCTAGAAATAGGACATTGAAACTCATGGATTCTGGTAACCTTGTGTTACTAGATGATAGGAATTTGAAACTCTGGCAAAGCTTCGAAAATCCATGTGACACATTCCTACCAGGTATGAAGATGGATAGTAAATTGAAATTGACCAGTTGGAAAAGTGCTGATGACCCTGGAATTGGGAATTTCAGTTTTGAGATGGAAAGAAAAGGGGACAGCCGTTATATTATCTATAACGGAAATCAAATTTATTGGGAGAGCGGCGAAACAAATAATAATCAATTTGATGACATCAACTTGGAGGTTTATAACTTGTTGACCAACTTCAGTACACATATACCGATCGATACAAGGTTGTTCCTTGATTCTACTGGTGTGATACGGTTGTTGGATTTGGAAGGTGATTTGTCAGGGAGGTGGAATCAGCCAAAAACCAATTGTTCAAAATATAATTTTTGCGGAGAATTTGCTAGCTGTAATGATGATGATGATAATAAGAAATGCAAATGTTTACCTGGATTTGACCATGCAGGAAAAGGAGATTCTTCTCTACAAAACAACGTAGGTTGTACAAGGAGAACGTCAGCATCCTGTGCTAGAAATGACACGCGGACATTCTTGAAATTGACCATGATTAAAACACGAAGGCCGGATTTAAAGCTCATGGTAGACCTTGAAGAAAATTGCACATCTATATGTCTTGAGAAGTGTCCACTGTGCCAGGCTTACTCATATGCTCCAGTACCCCTTACTCAGCGTACTCTTATTAATCCTTCAACATGTTGGATCTGGACAAACAATTTAACTACTCTTAAAGAAGAGTACACTGATGGGGATGATCATCGTACACTCTTTGTTTTAGTTGACAAATCAGATATAGAACCAACTCCAAGAACTTGTGAGCCTTGCGGTACAAACATAGTCCCTTATCCGCTTAGTACTGGATCCAACTGTGGAGACCTCGCATACTTCAACTTTAGTTGCAACAACTTAACGGGTCAACTTAACTTCGCCACCAACAACAACGTTAGTTACAGAGTTATTCGTGTATTGCCAAGTTCAAGAACGTTTACCATTTCTTATGACGGTAATTCTTTATATCAATATTGTGATGAAGGATCAAACCAAGCAGGAAATCTGAAAATTTCTTCACCCTATAGCATTATGAGTAACAATTTCTGCTCTGATCAAGTGGAAGTTAGTTGGGAACCACCTTCCAAAGAACCCCTTTGTGATAACTTTGGTGGTTGCCATGGTTGGAACCATTCTACTTGTACTAAAAGAAGGTGTCTCTGCAATGCAAACTATGAATGGAATGGCAAGCAATTAAGTTGTATAGAAAGATCTTCTCCCAGAGAGAAATCTAAAAGCTCGTTCTATTTGATTCTTGGTTTAACTCTTACTGGTGTGGTTACTCTAGCATGCATCATTATTTTTGGTTATGCATGCAGGCGAAGAATAGCTCATATGTTTAAGCAAGACAAGGAAAACATACAAAGAAATGTTAGAGGGCAATTTTACGACAGTGAAAGACATGTGAAGAACTTGATAGACATGGAGGGATTGGAAGAGAATGACAATGATGGAATAGAGGTTCCCTATTTCGATTTTGAGAGCATACTTATAGCCACAGATGAATTTTCAGATGCAAATAAACTTGGAAAAGGTGGTTTTGGGCCAGTTTACAAGGGTAAGCTTGGTGGTCAAGAAATCGCGGTAAAGAGACTTTCAAATGTTTCATCACAAGGCTTACAAGAATTCAAGAATGAAGTTGTTTTGATTGCTAAACTTCAACATCGAAACCTTGTTAAATTACGGGGCTACTGCATAAAAGGGGAGGAAAAAATTCTAATTTATGAATATTTGCCTAACAAAAGTTTGGACTTGTTGATATTTGATCCAACAAAATGCGTAATTTTGGATTGGCAAATGCGGTTTGATATAATTCTCGGAATTGCTCGTGGACTGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCACCGAGATTTGAAAACTAGCAACATTCTTCTAGACGAGGAGATGCAACCAAAAATCTCAGATTTTGGACTAGCAAGAATAGTTGGAGGTAAAGAAGTAGAGGCAAGCACAGAGAGGATTGTCGGTACATACGGGTACATGTCTCCTGAATATGCATTGGATGGATATTTCTCAACAAAGTCAGATGTTTTCAGTTTTGGCGTTGTCTTGCTTGAAATCATCAGTGGAAAAAGAAACACCGGATTCTTCCGGTCTAAAGAAATTTCAAGCCTTTTGGGTTATGCTTGGAGACTATGGAGAGAGGACAAATTGCAAGATTTAATGGACTCATCTCTATGCGATTCATACAATGCTAACCAATTTATTAGGTGTGCACAAATTGGACTCCTATGTGTGCAAGATGAACCAGATGATCGTCCACACATGTCAAATGTGGTGACTATGCTTGACAATGAAACTACAGCCCTCGTAACACCTAAACAACCAACCTTTTTTTCACGTAAAGACCTATCTAGTACAGCTTCTTCAAGCATACAGATTGAGAGTAGCATTCAAGAAGGTAGATAG 2988 0.3815 MSSNMGTVYLFFNLYTSWVLLICSSHLCLAGDTLKTGQQIIDNENDAILVSAGKIFDLGFFTPSMTGGTQRYLGIWYHINHTDRSEQSQKQTVVWVANRDKPIALNSSGVFQIAEDRNLVVVDTSGKNITYWSSSISSNSSPRNRTLKLMDSGNLVLLDDRNLKLWQSFENPCDTFLPGMKMDSKLKLTSWKSADDPGIGNFSFEMERKGDSRYIIYNGNQIYWESGETNNNQFDDINLEVYNLLTNFSTHIPIDTRLFLDSTGVIRLLDLEGDLSGRWNQPKTNCSKYNFCGEFASCNDDDDNKKCKCLPGFDHAGKGDSSLQNNVGCTRRTSASCARNDTRTFLKLTMIKTRRPDLKLMVDLEENCTSICLEKCPLCQAYSYAPVPLTQRTLINPSTCWIWTNNLTTLKEEYTDGDDHRTLFVLVDKSDIEPTPRTCEPCGTNIVPYPLSTGSNCGDLAYFNFSCNNLTGQLNFATNNNVSYRVIRVLPSSRTFTISYDGNSLYQYCDEGSNQAGNLKISSPYSIMSNNFCSDQVEVSWEPPSKEPLCDNFGGCHGWNHSTCTKRRCLCNANYEWNGKQLSCIERSSPREKSKSSFYLILGLTLTGVVTLACIIIFGYACRRRIAHMFKQDKENIQRNVRGQFYDSERHVKNLIDMEGLEENDNDGIEVPYFDFESILIATDEFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSNVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILIYEYLPNKSLDLLIFDPTKCVILDWQMRFDIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIVGGKEVEASTERIVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFFRSKEISSLLGYAWRLWREDKLQDLMDSSLCDSYNANQFIRCAQIGLLCVQDEPDDRPHMSNVVTMLDNETTALVTPKQPTFFSRKDLSSTASSSIQIESSIQEGR* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1372 995 ProSiteProfiles Protein kinase domain profile. 686 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1372 995 CDD STKc_IRAK 692 958 - -
Tpr4g1372 995 Gene3D - 25 170 IPR036426 -
Tpr4g1372 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Tpr4g1372 995 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 985 - -
Tpr4g1372 995 Gene3D Transferase(Phosphotransferase) domain 1 761 969 - -
Tpr4g1372 995 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 228 IPR036426 -
Tpr4g1372 995 SUPERFAMILY Protein kinase-like (PK-like) 669 978 IPR011009 -
Tpr4g1372 995 SMART blect_4 31 172 IPR001480 -
Tpr4g1372 995 CDD B_lectin 49 172 IPR001480 -
Tpr4g1372 995 Pfam S-locus glycoprotein domain 253 314 IPR000858 GO:0048544
Tpr4g1372 995 ProSiteProfiles Bulb-type lectin domain profile. 25 170 IPR001480 -
Tpr4g1372 995 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 25 985 - -
Tpr4g1372 995 Gene3D Phosphorylase Kinase; domain 1 650 760 - -
Tpr4g1372 995 Pfam Protein tyrosine and serine/threonine kinase 690 955 IPR001245 GO:0004672|GO:0006468
Tpr4g1372 995 ProSiteProfiles PAN/Apple domain profile. 337 428 IPR003609 -
Tpr4g1372 995 SMART serkin_6 686 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1372 995 Pfam D-mannose binding lectin 92 186 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1372 Tpr-Chr4 13262905 13270413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1372 674 994 Receptor kinase-like Gene Family AT4G11530 55.927 1.43e-119 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g1372 PK_Tyr_Ser-Thr 6.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1372 - - mtr:MTR_0148s0080 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1372 4 13262905 13270413 Tpr4g1372 4 13262905 13270413 ECH