Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1370 ATGAAGAAAAAACCACTCTTCTCACTTTCTCTCATCATCATCTTTTTATCTTTTCACACATACCCTTCACTTTCTGCTCTAACCATCATTTCATCAAATCAATCTCTTTCTGGTGATCAAACACTTGTCTCCAAAGATGAAAAATTTGAATTGGGTTTCTTCAATAAAGGTAATTCTTCTAAATTTTACATTGGCATGTGGTACAAAAAGATATCTATAAAGACATATGTTTGGGTAGCAAATAGAGATCATCCAGTTTCTGATAAAAATTCTTCTAAGTTAACTATATCTAATGGTAATTTAGTTCTCTTAGATCAGTCTCAAAATCTTGTTTGGTCAACAAATTTGAGTTCTAGTTCTAGTTCTAGAACAAGTTCTGTTGTTGCTGTTCTTTTAGATTCTGGTAATCTTATATTAAGTAATACGCCTAATGCGTCGGTATCAGAAGCTCTTTGGCAGAGTTTTGATTTTCCGACGAATACATGGCTTCCTGGTGGTAAAATAAAGCTTGATAAAATAACAAAGAAGCCTCAATATCTTACTGCATGGAAAAACAGCGATGATCCGGCAACAGGTTTATTTTCGCTTGAATTAGACCCTAATGGAACCAATTCGTATTTGATTCTTTGGAATAAAACCAAACAGTATTGGACAAGTGGTCCTTGGAATGGACAAATATTTAGTTTAGTTCCTGAAATGAGGTCAAATTATATCTACAATTTTAACTATGTGTCGAACACGACTGAGAGTTACTTCACGTATTCTGTTTACGACAGTTCTTTGATATCTCGTTTCGTGATGGATGTCTCGGGGCAAATCAAGCAATTTACTTGGCTTGAAAGTACTCAGCAATGGAATTTGTTTTGGTCACAGCCAAGAGGACAGTGTCAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGTAATGAGAATTCAAAACCATCTTGCAATTGTTTGAATGGTTATGTACCGAAGTCGCAATCTGATTGGGATCTTGGTGATTACTCACATGGTTGTGTGAAAAGAAACAAATTTCAATGTGAGGTAACTTCCAATCCTTCTAATGGTGCTAAGGATAGGTTCTCACCCAAATCCAATGTGGCTTTGCCTGAAGATGCAAAACAAGTTGTGGAAGCTGGTTCAGTTGATGAATGTGATTCAACTTGTTTGAGTAACTGTTCTTGCAATGCATATGCTTATAACAGTAGCGGATGTTTCGTTTGGCGAGGAGAACTCTTCAATCTGCAACAGCTTTCTCAAGATGATACTAATGGACAGACTTTGTTTCTAAAACTTGCAGCATCCGAGTTTTCTGATTCGAAAAGCAATAAAGGGACAACTATTGGTATTGTTGCTGGTGCTGTTGGTGGTATAGCAGTTGTTCTTGTTCTTGTCCTAATCGTCGTGATTAGGCGAAGAAAAAGACTTGCTGGAGCAAGAACTACTGTGGAAGGTTCATTGATAGCATTTGCATACAGAGATTTACAAACTGCTACGAAGAATTTCTCGGACAAACTTGGAGGAGGTGGTTTTGGTTCTGTCTTCAAAGGAACATTACCTGATTCAAGTGTCATAGCAGTGAAGAAACTCGAAAGCATTAGCCAAGGCGAGAAGCAGTTTCGAACAGAAGTGAGTACTATTGGAACTGTCCAACATGTCAACCTTGTTAGGCTTCGTGGTTTCTGTTCCGAAGGCGACAAAAGGCTTCTGGTTTATGATTACATGCCAAATGGGTCTTTGGATTCAAGTCTGTTTCAAGAAAATGTGTTGGACTGGAAAGTAAGATACCAAATTGCTCTCGGAATAGCTAGAGGATTGACTTATCTTCATGAAAAGTGTAGAGACTGTATCATTCACTGTGACGTGAAGCCGGAAAACATTCTCATAGATTCTGATTTTTGTCCAAAGGTAGCAGACTTCGGGCTTGCAAAGCTTGTCGGAAGGGACTTCAGCAGAGTCCTCACTACAATGAGAGGAACAAGAGGTTATCTAGCTCCAGAATGGATTTCAGGAGTGGCTATCACTGCTAAAGCCGATGTATACAGCTACGGAATGATGCTTTTTGAGCTCGTTTCAGGTAGACGGAACTCTGATCCTTCTGAAAATGGTCAAGTTAAATTCTTTCCTACATTGGCTGCAAACGTAGTACACCAAGGAGGGAATGCGATTAGCCTATTGGACTCGAGATTGGATGGAGATGCCGATGCTGAAGAGATCGCTAGAGTCATAAAAATAGCTTCATGGTGTGTTCAAGATGATGAAGCTCATAGGCCATCCATGGGTCAAGTAGTTCAAATACTTGAAGGTGTTTTGGATGTGACTTTGCCTCCAATTCCTAGATCACTTCAAGCTTTTATTGATGACCATGAGGACATTGTTTTCTTCACTGATTCGAGCTCAACTCATAACTCACAGGTAAAGAGCAATGCTTCAACAGCCTCATCTCAAGCCAAAAGCAACATCTCATCTGCTAGCACATAG 2481 0.391 MKKKPLFSLSLIIIFLSFHTYPSLSALTIISSNQSLSGDQTLVSKDEKFELGFFNKGNSSKFYIGMWYKKISIKTYVWVANRDHPVSDKNSSKLTISNGNLVLLDQSQNLVWSTNLSSSSSSRTSSVVAVLLDSGNLILSNTPNASVSEALWQSFDFPTNTWLPGGKIKLDKITKKPQYLTAWKNSDDPATGLFSLELDPNGTNSYLILWNKTKQYWTSGPWNGQIFSLVPEMRSNYIYNFNYVSNTTESYFTYSVYDSSLISRFVMDVSGQIKQFTWLESTQQWNLFWSQPRGQCQVYAFCGAFGSCNENSKPSCNCLNGYVPKSQSDWDLGDYSHGCVKRNKFQCEVTSNPSNGAKDRFSPKSNVALPEDAKQVVEAGSVDECDSTCLSNCSCNAYAYNSSGCFVWRGELFNLQQLSQDDTNGQTLFLKLAASEFSDSKSNKGTTIGIVAGAVGGIAVVLVLVLIVVIRRRKRLAGARTTVEGSLIAFAYRDLQTATKNFSDKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGDKRLLVYDYMPNGSLDSSLFQENVLDWKVRYQIALGIARGLTYLHEKCRDCIIHCDVKPENILIDSDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSDPSENGQVKFFPTLAANVVHQGGNAISLLDSRLDGDADAEEIARVIKIASWCVQDDEAHRPSMGQVVQILEGVLDVTLPPIPRSLQAFIDDHEDIVFFTDSSSTHNSQVKSNASTASSQAKSNISSAST* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1370 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 5 797 - -
Tpr4g1370 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 223 IPR036426 -
Tpr4g1370 826 SMART ntp_6 356 432 IPR003609 -
Tpr4g1370 826 MobiDBLite consensus disorder prediction 804 826 - -
Tpr4g1370 826 PIRSF SRK 1 820 IPR024171 GO:0004674
Tpr4g1370 826 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 5 797 - -
Tpr4g1370 826 Gene3D Transferase(Phosphotransferase) domain 1 575 774 - -
Tpr4g1370 826 CDD B_lectin 33 158 IPR001480 -
Tpr4g1370 826 CDD STKc_IRAK 506 769 - -
Tpr4g1370 826 ProSiteProfiles PAN/Apple domain profile. 347 433 IPR003609 -
Tpr4g1370 826 SUPERFAMILY Protein kinase-like (PK-like) 484 768 IPR011009 -
Tpr4g1370 826 Pfam PAN-like domain 357 415 IPR003609 -
Tpr4g1370 826 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Tpr4g1370 826 ProSitePatterns Protein kinases ATP-binding region signature. 506 529 IPR017441 GO:0005524
Tpr4g1370 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Tpr4g1370 826 Gene3D Phosphorylase Kinase; domain 1 466 574 - -
Tpr4g1370 826 CDD PAN_AP_plant 354 433 - -
Tpr4g1370 826 Pfam Protein kinase domain 503 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1370 826 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Tpr4g1370 826 SMART serkin_6 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1370 826 Gene3D Hepatocyte Growth Factor 354 433 - -
Tpr4g1370 826 ProSiteProfiles Protein kinase domain profile. 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1370 826 SMART blect_4 33 158 IPR001480 -
Tpr4g1370 826 Gene3D - 25 155 IPR036426 -
Tpr4g1370 826 Pfam D-mannose binding lectin 75 184 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1370 Tpr-Chr4 13235189 13238085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1370 438 773 Receptor kinase-like Gene Family AT1G56120 44.898 1.19e-78 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr4g1370 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1370 - - gmx:100305421 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1370 4 13235189 13238085 Tpr4g1370 4 13235189 13238085 ECH