Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1365 ATGAAGAGAAAACCATTGTTCTTGCTTTCACTCATCATTTTATTCTCTTTGCACACCTACCCTTCACTTTCTGCTATAACCATCATCTCATCAAACCAATCTCTTTCTGGTGATCGAACTCTGGTTTCCAAAGATGAAAACTTTGAATTGGGTTTCTTCAATACACGTAATTCCTCTAATTACTACATAGGTATTTGGTACAAAAAGATATCTATAAGGACATATGTTTGGGTAGCAAATAGAGATCACCCAGTTTCTGATAAAAAATCTTCCAAGTTAACTATATCTGATGGTAATTTAGTTCTCTTGGATCAGTCTCAAAATCTTGTTTGGTCAACAAATTTGAGTTCTAGTTCTAGTTCTAGTTCTAGTTCTACTAGTACTAGATCAAGTTCTGTTGTTGCTGTTCTTTTAGATTCTGGTAATCTTATATTAAGTAATAGGCCTAATGCGTCCGAATCCGAAGCTCTTTGGCAGAGTTTTGATTTTCCAACAAATACATGGCTTCCTGGTGGCAAAATTAAACTTGATAAAGTAAACAAGAAGCCTACATATCTTACTGCATGGAAAAACAGTGAAGATCCGACATCAGGTATATTCTCTCTTGAACTAGACCCTAATGGAACCAATTCATATTTTATGCTTTGGAATAAAACTCGTCAGTATTGGACAAGCGGTACTTGGAATGGACAAAAATTTAGCTTGGTTCCTGAAATGAGGTTAAACTACATTTACAATTTCACCTTTATGGAAAGCAAAAACGAGAGCTACTTTACATACTCTTTGTATAACAATACTATTATATCTCGTTTTGTGATGGATTTGTCGGGGCAGGTCAAGCAATTTTCTTGGCTCGAAAGTACTCAGAGCTGGAATTTGTTTTGGTCAAGGCCAATAGGACAGTGCGAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGTAATGAGAACTCAAAGCCAGCTTGCAATTGTTTGAATGGTTATGAACCAAAGTTGAAATCTGATTGGGATCTTGGTGATTACTCACATGGTTGTGTGAAAAGAAACAAGTTTCAATGTGAGGTATCTTCCAAGCCTTCTAGCGGTGCCAAGGATAAATTCTTATCCATATCCAGTCTGGCTTTGCCTGAAGATGCAAAACATGCTGTGGAAGCTGGTTTAGTTGACGAATGTGAGTCAACCTGTTTGAGCAACTGTTCTTGCACTGCATATGCTTATAACAGTAGCGGTTGTTTCATTTGGAAGGGAGAGTTCTTGAATCTGAAACAGATTTCTCAAGATGATAGGAATGGACAGACTTTGTTTCTAAAACTTGCTGCATCTGAGTTTTCTGATTCTAAAAGCAACAAAGGGATAACAAGCATTGGTATTGTTTCTGGTGCTGTTGGCGGTATAGTGGTTCTCTTTGTTTTTGTTCTAATTGTCGTGATTAGGCGAAGAAAGAGACTAGCTGGAGCAAGAACTTCTGTTGGGGGCTCATTGATAGCATTTGCATACAGAGATTTGCAAAATGCTACCAAGAATTTCTCAGACAAACTTGGAGGAGGAGGTTTTGGTTCTGTTTTCAAAGGAACATTACCTGATTCAAGTGTCGTAGCGGTGAAGAAACTCGAAAGCATTAGCCAAGGCGAGAAGCAGTTTCGAACAGAAGTGAGTACTATTGGGACTGTACAACATGTCAACCTTGTTAGGCTTCGTGGTTTCTGTTCCAAAGGCGACAAAAGGCTTCTGGTTTATGATTACATGCCAAATGGGTCTTTGGATTCAAGTCTGTTTCAAGAAAAGGTGTTGAATTGGAAAGTAAGATATCAAATTGCTCTCGGAATAGCTAGAGGATTGACTTATCTTCATGAAAAATGTAGAGACTGTATCATTCACTGCGACGTGAAGCCGGAAAACATTCTCATAGATTCTGATTTTTGTCCAAAGGTAGCAGACTTCGGCCTTGCAAAGCTTGTCGGAAGGGACTTCAGCAGGGTCCTCACTACCATGAGAGGAACTAGAGGTTATTTAGCTCCAGAATGGATTTCAGGAGTAGCTATTACCGCTAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTTGAGCTCGTTTCAGGTAGACGGAACTCTGATCCTTCCCAAAATGGTCAAGTTAAATTCTTTCCTACATTGGCTGCAAACGTAGTACATCATGGAGGGAATGTGATTAGCCTATTGGACTCGAGATTGGAGGGAGATGCCAATGTTGAAGATATCGCTAGACTCATAAAAATAGCTTCATGGTGTGTTCAGGATGATGAAGCTCATAGGCCATCCATGGGTCAAGTAGTTCAAATACTTGAAGGGGTTTTGGATGTGTCTTTGCCTCCAATTCCTAGATCACTTCAAGCTTTTATTGATGACCATGAGGACATTGTTTTCTTCACTCATAACTCACAGGGTGCTGCATGA 2433 0.3929 MKRKPLFLLSLIILFSLHTYPSLSAITIISSNQSLSGDRTLVSKDENFELGFFNTRNSSNYYIGIWYKKISIRTYVWVANRDHPVSDKKSSKLTISDGNLVLLDQSQNLVWSTNLSSSSSSSSSSTSTRSSSVVAVLLDSGNLILSNRPNASESEALWQSFDFPTNTWLPGGKIKLDKVNKKPTYLTAWKNSEDPTSGIFSLELDPNGTNSYFMLWNKTRQYWTSGTWNGQKFSLVPEMRLNYIYNFTFMESKNESYFTYSLYNNTIISRFVMDLSGQVKQFSWLESTQSWNLFWSRPIGQCEVYAFCGAFGSCNENSKPACNCLNGYEPKLKSDWDLGDYSHGCVKRNKFQCEVSSKPSSGAKDKFLSISSLALPEDAKHAVEAGLVDECESTCLSNCSCTAYAYNSSGCFIWKGEFLNLKQISQDDRNGQTLFLKLAASEFSDSKSNKGITSIGIVSGAVGGIVVLFVFVLIVVIRRRKRLAGARTSVGGSLIAFAYRDLQNATKNFSDKLGGGGFGSVFKGTLPDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSKGDKRLLVYDYMPNGSLDSSLFQEKVLNWKVRYQIALGIARGLTYLHEKCRDCIIHCDVKPENILIDSDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSDPSQNGQVKFFPTLAANVVHHGGNVISLLDSRLEGDANVEDIARLIKIASWCVQDDEAHRPSMGQVVQILEGVLDVSLPPIPRSLQAFIDDHEDIVFFTHNSQGAA* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1365 810 PIRSF SRK 1 808 IPR024171 GO:0004674
Tpr4g1365 810 ProSiteProfiles Bulb-type lectin domain profile. 26 158 IPR001480 -
Tpr4g1365 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Tpr4g1365 810 Pfam D-mannose binding lectin 74 190 IPR001480 -
Tpr4g1365 810 SMART serkin_6 507 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1365 810 ProSitePatterns Protein kinases ATP-binding region signature. 513 536 IPR017441 GO:0005524
Tpr4g1365 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 229 IPR036426 -
Tpr4g1365 810 SMART blect_4 32 164 IPR001480 -
Tpr4g1365 810 Gene3D - 24 161 IPR036426 -
Tpr4g1365 810 Pfam PAN-like domain 363 420 IPR003609 -
Tpr4g1365 810 CDD STKc_IRAK 513 776 - -
Tpr4g1365 810 ProSiteProfiles Protein kinase domain profile. 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1365 810 SUPERFAMILY Protein kinase-like (PK-like) 492 775 IPR011009 -
Tpr4g1365 810 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 803 - -
Tpr4g1365 810 Gene3D Phosphorylase Kinase; domain 1 474 581 - -
Tpr4g1365 810 SMART ntp_6 362 438 IPR003609 -
Tpr4g1365 810 CDD PAN_AP_plant 360 439 - -
Tpr4g1365 810 CDD B_lectin 32 164 IPR001480 -
Tpr4g1365 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 803 - -
Tpr4g1365 810 ProSiteProfiles PAN/Apple domain profile. 353 439 IPR003609 -
Tpr4g1365 810 Pfam Protein kinase domain 510 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1365 810 Gene3D Transferase(Phosphotransferase) domain 1 582 781 - -
Tpr4g1365 810 Pfam S-locus glycoprotein domain 223 331 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1365 Tpr-Chr4 13200388 13205622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1365 490 784 Receptor kinase-like Gene Family AT5G20050 43.949 2.32e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr4g1365 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1365 - - gmx:100305421 1191.41