Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1341 ATGGCAAATGGGTTGGAAAATGAAAGTGGGGTGTCAATGTTGTTTAGTGAGGAAGAGTTGAGAGAGATGAGTGGAGTGAATTTTTTTGATGATTATGTTGAAGTTATGTGTGGTTGTACTAGTCATAGATATGGTGATGCTGTTGGTAGACTTAGGGTTTATCTTAGTGGCTTCCTTCAAATTATTTGTGAATGCACCCCTGGTTGTCAAGAAGACAAGTTGACTCCTTCTGCATTTGAGAAACATTCTGGAAGAGAGACGGCAAGGAAATGGAAGAATAATATCTGGGTTATAATTAATGGTGAGAAGGTTCCATTGGGCAAAACAGTACTGCTCAAATACTACAATCAAGTGTTAAAAGGTGCTAATAGCTCTCAGAGGTCCCTAAGTGGACGTGTTGGTCACCGCGATGAGTTTGTTCGCTGTACTAAGTGTAACAAAGAGCGTAGATTTCGTCTGAGATCTAAAGAGGAATGTCGCATTCACCATGATGCTGTGGCAGATGCAAATTGGAAGTGTTCTGATCTTCCATATGACAAGATAACATGCGATGATGAAGAAGAACGAGGAAGTCGAAGAGTTTACAGAGGATGTGGTCGATCTCCAACATGTAAAGGTTGCACTTCTTGTGTGTGCTTTGGATGTGACATCTGCCGCTTTTCGGATTGCAGCTGCCAGACATGTACTGACTTTACTAGCAATGCAAAAGCTTGA 714 0.4146 MANGLENESGVSMLFSEEELREMSGVNFFDDYVEVMCGCTSHRYGDAVGRLRVYLSGFLQIICECTPGCQEDKLTPSAFEKHSGRETARKWKNNIWVIINGEKVPLGKTVLLKYYNQVLKGANSSQRSLSGRVGHRDEFVRCTKCNKERRFRLRSKEECRIHHDAVADANWKCSDLPYDKITCDDEEERGSRRVYRGCGRSPTCKGCTSCVCFGCDICRFSDCSCQTCTDFTSNAKA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1341 237 Gene3D - 20 116 IPR010919 -
Tpr4g1341 237 Pfam SAND domain 54 102 IPR000770 GO:0003677
Tpr4g1341 237 PANTHER PROTEIN ULTRAPETALA 1 1 236 IPR020533 -
Tpr4g1341 237 PANTHER PROTEIN ULTRAPETALA 1 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1341 Tpr-Chr4 12957508 12962607 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Tpr4g1341 SAND 5.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1341 - - gmx:100815782 441.81