Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1338 ATGGATTGGAAGAGATCTATTTTGAAGATCTATGGACATGTTGTTCTATTGGGATTTTTGTTGATTTGTATAATTCAGATTTCAACTGCTGTTACTGATCCTACTGATGTTGCTGCACTTAATAGCTTACATTCTTCATTGGGATCTCCTCTTCTACCTGGGTGGGTTTCTAGTGGTGGAGATCCGTGCGGAGAAGGGTGGCAAGGCATTCAATGTAATGGTTCGTTCATACAAAAAATTGTTCTAAACGGTGCAAATCTGGGAGGAGAGCTGGGTGATAAACTTGCAACATTTGTTTCAATCTCAGTAATCGATCTGAGCAACAACAACATTGGAGGAAGTATTCCGTCCAATTTGCCAGCTACCATGAGAAACTTTTTTCTTTCAGCCAACCTGTTTACTGGAAGTATTCCAGCCTCTTTATCGGCTTTAACTGGACTGAGTGACATGTCTCTTAACAACAATCATTTAACCGGAGAAATACCAGATGCATTTCAGTCACTTACACAATTGATCAATCTAGATTTGTCAAGTAATAACTTGAGCGGGGAGCTACCTCCTTCGATGGAGAACTTGTCATCTTTGACCACCCTGCGCTTGCAGGATAATCAATTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTCGAGAATAACCAATTTGCTGGACCGATACCTCCGAAGTTGCTAAACATCCCTAAATTCAAACAAGCTGGAAATCCATTCAATGATAATTCCACGGCAACTCGTGCTCCCGCACCTCGCTCCCCAGTGATAGCACCGCCAGGATCACCACCAGGAGCACCGTTTTTTGTAGTACCATCTTCTGGTTCTGGCCCTGTACCTACTAAACAGGCTGATGGACCGACTGCAGCGACTAAGTCAAATTCTGGGAAATCAAACAAACATACCAAAAGGGTGGTTTTGATAGCTATTGGCAGTGTTTTGGCATTCATTATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGGTAGAAGGGAACGACGGGTTGACCGAAGGTCCAGGCGACATCAAATTGGTGCATATGGGGATGAAAGACAACAAAATCCTAGAGATTTAGGGGCTATAGTTCAACCACCAATTCAAACAGAAAAAGTACCAATACCGACACGGGATGTCTTGAGGCCACATACTGATCGCCAAGAAGAGCCTAGGAGAGCATGGGCTGTTCCAAATGCACAGGATAAGCAAGAGAAGGATGTGCTAAGAATGATGGCAATACCAAAGCCGGTTCATCATGAGATTCCAAAGCCGGTTCATCATGAGATCGATATCAGTACACCAGAAGTGTATTCTGTGCCTCCGCCTCCACCACCACCTCCTCCTCCTCCACCGCCACCCCCACCGCCACCTCCTCCTGTTCTTCCTACTAAGAAGATGATTGTTGAGCCAACAATTCCCCATAGAGGAACTAATGCCGGTCCATCCTTAAGAAGTTCAATTCAACCTCCTACTTTTGCGAAATCTTTCACCATCGCATCCCTTCAACAGTATACAAATAGCTTCTCTCCAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTGTACAGGGCAGAGCTCCCTGGTGGGAAGCTACTTGCTGTAAAGAAACTCGACAGAAGAGCCTCTGTTCACCAAAAGGATGATGAGTTTCTTGAATTGGTAAATAGTATCGACAGAATAAGACATACAAATATTGTTGAGCTCATTGGATACTGCTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGTACTGCAGTAACGGATCACTATATGATGCACTTCACACAGATGAAGAATTTAAAGCAAAACTATCATGGAATGCTCGCATTCGGATGGCACTTGGTACAGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCGCCTGTGGTACACAGAAATTTGAAGTCTGCCAATGTTCTCCTTGACGATGATCTATCTGTGCGCGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCAGGGTCTGTAACTCAGCTCTCGGGGAACCTGCAATCAGCTTATGGTTATGGAGCTCCAGAATTTGAATCGGGAACTTACACTTACCAAAGCGATGTATACAGCGTTGGAGTAGTTATGTTAGAACTTTTGACCGGCCGTCAGTCCCATGACAGGACACGTCCACGAGGGGAGCAATTTCTTGCTAGATGGGCAATTCCCAAACTTCACGATATTGACGCATTATCAAAGATGGTTGATCCTTCTTTAAATGGAGTTTACCCTGCAAAGTCATTGTCAAATTTTGCCGACATTATTGCTCGATGCCTTCAGCCGGAGCCCGAATTTAGGCCAGCAATGTCAGAGGTGGTCTTATACCTACTAAATATGATAAAGAGGGAGTCTCAAAAAAGTGATTCAAATGAAAAATGA 2424 0.4377 MDWKRSILKIYGHVVLLGFLLICIIQISTAVTDPTDVAALNSLHSSLGSPLLPGWVSSGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLATFVSISVIDLSNNNIGGSIPSNLPATMRNFFLSANLFTGSIPASLSALTGLSDMSLNNNHLTGEIPDAFQSLTQLINLDLSSNNLSGELPPSMENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLNIPKFKQAGNPFNDNSTATRAPAPRSPVIAPPGSPPGAPFFVVPSSGSGPVPTKQADGPTAATKSNSGKSNKHTKRVVLIAIGSVLAFIILVLALVLFIPRCGRRERRVDRRSRRHQIGAYGDERQQNPRDLGAIVQPPIQTEKVPIPTRDVLRPHTDRQEEPRRAWAVPNAQDKQEKDVLRMMAIPKPVHHEIPKPVHHEIDISTPEVYSVPPPPPPPPPPPPPPPPPPPPVLPTKKMIVEPTIPHRGTNAGPSLRSSIQPPTFAKSFTIASLQQYTNSFSPENLIGGGMLGTVYRAELPGGKLLAVKKLDRRASVHQKDDEFLELVNSIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLYDALHTDEEFKAKLSWNARIRMALGTARALEYLHEQCQPPVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVTQLSGNLQSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDRTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVYPAKSLSNFADIIARCLQPEPEFRPAMSEVVLYLLNMIKRESQKSDSNEK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1338 807 PANTHER OS01G0253100 PROTEIN 23 806 IPR045271 GO:0004714|GO:0006468
Tpr4g1338 807 Gene3D Ribonuclease Inhibitor 32 255 IPR032675 -
Tpr4g1338 807 MobiDBLite consensus disorder prediction 284 304 - -
Tpr4g1338 807 Gene3D Transferase(Phosphotransferase) domain 1 595 807 - -
Tpr4g1338 807 MobiDBLite consensus disorder prediction 345 367 - -
Tpr4g1338 807 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Tpr4g1338 807 SUPERFAMILY L domain-like 32 239 - -
Tpr4g1338 807 Pfam Protein tyrosine and serine/threonine kinase 521 789 IPR001245 GO:0004672|GO:0006468
Tpr4g1338 807 MobiDBLite consensus disorder prediction 284 307 - -
Tpr4g1338 807 Gene3D Phosphorylase Kinase; domain 1 489 594 - -
Tpr4g1338 807 SUPERFAMILY Protein kinase-like (PK-like) 492 791 IPR011009 -
Tpr4g1338 807 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 23 806 - -
Tpr4g1338 807 ProSiteProfiles Protein kinase domain profile. 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1338 Tpr-Chr4 12932719 12939104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1338 22 802 Strubbelig Receptor Gene Family AT4G03390 58.438 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr4g1338 PK_Tyr_Ser-Thr 7.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1338 - - mtr:MTR_4g046113 1269.22