Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1330 ATGGGTTGTTGTGTGTCAACGAGCAGTCGGAGTACTTGTAGCAGCGGGAGCAATGGAGATATGGCTACTCCAACTTGCTTAGAAATTGGATTCTGTGCGAAAAAGAGAGCGAGGAGAACGTTCTCCGACCATGTTATTTCTCTACATCATTTATCATCATTACCTAGCAGAATTTTCACTAATGGAAAGAGTCGTGGTTCGTGCATATTTACGCAGCAGGGCCGTAAGGGAATTAATCAGGACGCTATGGTTGTGTGGGAAGATTTCATGTCCGAAGATATGATCTTTTGTGGTGTTTTTGATGGCCATGGTCCACAAGGTCATCTTGTTGCACGTAAAGTGAGGGATACCTTACCAGTAAAATTGCTTTCGTTTTTGCATTCTTATGAATCAAAGCGAAACGGGTCGGCCAAAGCTTGTTTGAAACGGAACATGAAATCGGACGGTGGAGACACTGAGAAAGATATCTCTTCTGAGGATAAACTGAACTCCACATGGAAAGAAGCTTTCATGAAAGCATACAAGGCCATGGACAAAGAGCTCAGTTCTCACCCGAAACTTGACTGCTTCTGTAGTGGCAGCACATCCGTGACTATAGTGAAGCAGGGTTCAAATCTCTTCATGGGATATATTGGCGATTCTCGAGCAATCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTACCAAGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGTAGGGTTTTTGCTTTGCAAGATGAACCGGAAGTGTCTAGGGTATGGTTGCCTTTTGATGATGCACCGGGGTTGGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCAGAATTTTCTCACCGGCTGCTTACGGACAGAGATCAATTCATTGTTCTTGCCTCTGACGGGGTTTGGGATGTCTTAAGTAATGAGGAGGTAGTTGAGATAGTATCGTCAGCACCAACACGATCATCAGCAGCAAGAATTCTGGTAAATTCAGCTGCTCGTGAATGGAAACTCAAGTACCCAACTTCGAAGATGGATGACTGTGCTGTAGTGTGCTTATTTTTAGATGGTAAAATGGATTCAGAGTCAGATTATGAGGAACAATGCTTCTCTTCTGCTACCATTCAGAGTAACCATTCGGGAAATCCAATCGAATCAGATGATGGACAAAAGTCCGAGCCATCTTTGCAAAGGAACTTTACTGTGAGATCATCGGAAGAAAACGAGATTAATGGAGCAGTGTCAGTTGATGTTGAAGATGGAACAGCGCCCGCTGATGATCAAAACTGGTTAGGCTTGGAAGGGGTCACCCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCAGAAGAAAGGTCAAAGTCAAACTCTTGA 1419 0.439 MGCCVSTSSRSTCSSGSNGDMATPTCLEIGFCAKKRARRTFSDHVISLHHLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDMIFCGVFDGHGPQGHLVARKVRDTLPVKLLSFLHSYESKRNGSAKACLKRNMKSDGGDTEKDISSEDKLNSTWKEAFMKAYKAMDKELSSHPKLDCFCSGSTSVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQCFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENEINGAVSVDVEDGTAPADDQNWLGLEGVTRVNSLVQLPRFSEERSKSNS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1330 472 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Tpr4g1330 472 SMART PP2C_4 50 368 IPR001932 -
Tpr4g1330 472 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Tpr4g1330 472 CDD PP2Cc 65 370 IPR001932 -
Tpr4g1330 472 MobiDBLite consensus disorder prediction 391 411 - -
Tpr4g1330 472 Gene3D - 58 378 IPR036457 -
Tpr4g1330 472 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Tpr4g1330 472 Pfam Protein phosphatase 2C 136 340 IPR001932 -
Tpr4g1330 472 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1330 Tpr-Chr4 12866135 12871532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1330 1 470 PP2C-type Phosphatase Gene Family AT1G03590 69.247 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1330 - - gmx:100813306 844.728