Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1299 ATGGCTGCTGCTGACAACACCACCAAACCCACGGATTATTACAAAGTGCTGGAGATTAGTTATGATGCAACAGATGAAGATATCAGATTAAATTACCGAAGACTCGCCCTGAAATGGCATCCTGACAAACACAAAGATGATAGTGCCGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTACTGATCGATCCTGCCAAGCGTTTAGACTATGATTTAACTGGATCATGTGAAATTGAGAAGTATAGCTTGCAGGAATATCTTGCCAGATTTAAAGGAATGATTCTGACTTGCAATGGACTTGGTATAAGCCACGAAGACAGATGGTCACCACAATTGATTGAAGGTTTTGAACGACCAGATAAATAA 375 0.392 MAAADNTTKPTDYYKVLEISYDATDEDIRLNYRRLALKWHPDKHKDDSAVTAKFQEINEAYNVLIDPAKRLDYDLTGSCEIEKYSLQEYLARFKGMILTCNGLGISHEDRWSPQLIEGFERPDK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1299 124 SUPERFAMILY Chaperone J-domain 8 97 IPR036869 -
Tpr4g1299 124 Gene3D DnaJ domain 2 94 IPR036869 -
Tpr4g1299 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Tpr4g1299 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Tpr4g1299 124 PRINTS DnaJ domain signature 49 69 IPR001623 -
Tpr4g1299 124 PRINTS DnaJ domain signature 69 88 IPR001623 -
Tpr4g1299 124 CDD DnaJ 12 66 IPR001623 -
Tpr4g1299 124 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 116 - -
Tpr4g1299 124 SMART dnaj_3 11 69 IPR001623 -
Tpr4g1299 124 Pfam DnaJ domain 12 74 IPR001623 -
Tpr4g1299 124 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Tpr4g1299 124 PANTHER DNAJ PROTEIN-LIKE 4 116 - -
Tpr4g1299 124 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1299 Tpr-Chr4 12548508 12552884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1299 1 74 C2H2 Transcription Factor Family AT1G74250 43.038 1.66e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1299 - - gmx:100305987 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1299 4 12548508 12552884 Tpr4g1299 4 12548508 12552884 ECH