Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1297 ATGGCTTCTGGATCATCCGGTCGCGGCGGTAATCCCGGTTCCAAAGGCTTCGATTTTGCATCCGATGACATCCTTTGCTCCTACGACGACTTTTCCAACAGGGATTCCAATTCCAATGGCAATCACACCGATTCAACCAAGGATTTTCAAAAATCAAGGGTAGCAAGGACATCAGTTTTTCCTGCTACTGGCTATAATCCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCAACTGTTGATAAGAGTATGAAGAAATATACTGATAACCTAATGCGATTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTATAATCTTGACAAATCTATTGGAGAAATTAGATCTGATATAAATCGTGATCACGGGGAGCAGGATTCAAAGCTCAAATCTCTTGAAAAGCATGTTCAGGAAGTTCACAGGTCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCTGAGACTCAGAAAGAATTAGCCAAGCTGCAACTTGCTCAGAAAGAATCATCTTCCTCAAGCCATTCACAGTCCAATGAGGACAGATCTACACCTTCTACCACAGATCCTAAAAAAACTGATAATGCATCTGATGCGAACAACCATCAGTTAGCTCTCGCCCTGCCTCATCAAATTGCTCCTCAGCTGCCACCTGCAGGACCCCCACCCCAAGCTCAACCACCAAATGTGAATCAACCCACTCAACAACCCGCTTATTACATGCAGGCTGCACCTACACCGTCTCAGCTACCCCAGAATCAGTATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAACAAGACATGTCCCGGGTGGCTCAACAATCAACACCATCTCAAATAAACCCTCCCACATCTGTGCAACAATTTTCTCAGTACCAGCAGCAGCAGCAGCAGCCATGGCCTCAGCAGGTGCAACAATCCTCAATGCAACCTCAAATGAGACCCCTCTCACCTGCTGTTTATCCTCCATACCAACCAAACCAAACATCAAATCCATCACCCACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCGCAACCAGGATCCAGCCGTACTGATTCCATGCAATATGGATATGGTGGAACTGGTAGAGCAGTTCCACAGCAACCTCCACCCCAGCAAATCAAGGGCTCATTCTCTTCACAACCCAGTGATGCATATGGAGCTAGCGGGACCCACACTCCTCCTGGGAATGCATACATGATGTATGATGGCGGTGAGGGAGGAAGGACACAGCATCCACCACCTCAACCCTCTCATTTTGCTCAATCTGGATATCCTCCAACAGGTGCTTCCCTTCAGAACCCCAATCTCATGGTCCGAAATCCTAGCCAGTCACAGTTTGCACGCAACCATCCTTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCACGTGGTGAGCGTGATCCAAAGGATGGAGGAGAGTGGACAGACCGTAGATTTCAACTCTATTCTTGACAGGTTGAATGGTCCCCAGAGAGGGTGGTCAGGGTGA 1554 0.4678 MASGSSGRGGNPGSKGFDFASDDILCSYDDFSNRDSNSNGNHTDSTKDFQKSRVARTSVFPATGYNPPEDSLSQDVIATVDKSMKKYTDNLMRFLEGISSRLSQLELYCYNLDKSIGEIRSDINRDHGEQDSKLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDRSTPSTTDPKKTDNASDANNHQLALALPHQIAPQLPPAGPPPQAQPPNVNQPTQQPAYYMQAAPTPSQLPQNQYMPSDQQYRTPQLQQDMSRVAQQSTPSQINPPTSVQQFSQYQQQQQQPWPQQVQQSSMQPQMRPLSPAVYPPYQPNQTSNPSPTETLPNSMPMQMPYSGVPQPGSSRTDSMQYGYGGTGRAVPQQPPPQQIKGSFSSQPSDAYGASGTHTPPGNAYMMYDGGEGGRTQHPPPQPSHFAQSGYPPTGASLQNPNLMVRNPSQSQFARNHPYNELIEKLVSMGFRGDHVVSVIQRMEESGQTVDFNSILDRLNGPQRGWSG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1297 517 MobiDBLite consensus disorder prediction 381 405 - -
Tpr4g1297 517 MobiDBLite consensus disorder prediction 376 408 - -
Tpr4g1297 517 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 515 - -
Tpr4g1297 517 Coils Coil 134 170 - -
Tpr4g1297 517 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 515 - -
Tpr4g1297 517 MobiDBLite consensus disorder prediction 167 200 - -
Tpr4g1297 517 MobiDBLite consensus disorder prediction 259 320 - -
Tpr4g1297 517 Pfam UBA-like domain (DUF1421) 468 509 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1297 Tpr-Chr4 12532939 12538674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1297 57 195 Trihelix Transcription Factor Family AT5G14540 33.813 1.45e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1297 - - gmx:100782994 708.368