Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1282 ATGAACAATAACCAAACCAATTCTTCTGTTTTGTTTTTGTCTCAATTTCAACTGTGTCTTTATTCTCTCAAAAAATTTATAATGGCTTCTACAGTTACTTCACGTTTTCATGAATCCTTCACCAAAAATGCACTTCGTTCTTATCTTGCAGAATTTATCTCAACTTTTTTCTATGTCCTTATTGTTATTGGCTCTGGAATGTCCTCAAGGAAGTTGATGCCTGATGCATCACTGAACCCAACAAGTTTGGTTGTGGGTGCTATTGCAAATGCTTTTGCACTTTCATCTGTTTTGTATATTGAATGGGAAGTCTCAGGTGGACATGTCAATCCTGCTGTGACCTTTGCAATGGCAGTTGGAGGCCATATTAGTGTCCCAATTGCTCTCTTTTATTGGGTTGCTCAACTTATTGCCTCTGTTATTGCCTGCCTTTTCCTCAAAGTCATAGTTGTTGGAATGCATGTACCAACATACACAATTGCAGAAGAGATGACAGGATTTGGAGCATCAGTATTAGAGGGTACCCTAACATTTGTTTTAGTGTACACAATATATGCTGCAAGAGACACTAGGCGTGGACGAGTAAGTTCAACAGGAACGCTTATAATAGGTTTAATAACAGGAGCAAGTGTTTTAGCAGCAGGTCCATTTTCTGGTGGTTCAATGAATCCTGCATGTGCTTTTGGTTCTGCTTCCATTGCTGGAACATTCAGGAATCAAGCTGTTTATTGGGTTGGTCCTTTGGTTGGTGCTGCTGTTGCTGGTCTTCTTTATGATAATGTGTTGTTTCCTTCTCAGAATTCAGATGAAAATGTTAGGGTGTGA 825 0.3927 MNNNQTNSSVLFLSQFQLCLYSLKKFIMASTVTSRFHESFTKNALRSYLAEFISTFFYVLIVIGSGMSSRKLMPDASLNPTSLVVGAIANAFALSSVLYIEWEVSGGHVNPAVTFAMAVGGHISVPIALFYWVAQLIASVIACLFLKVIVVGMHVPTYTIAEEMTGFGASVLEGTLTFVLVYTIYAARDTRRGRVSSTGTLIIGLITGASVLAAGPFSGGSMNPACAFGSASIAGTFRNQAVYWVGPLVGAAVAGLLYDNVLFPSQNSDENVRV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1282 274 Pfam Major intrinsic protein 42 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 PANTHER AQUAPORIN-8 31 271 IPR034294 -
Tpr4g1282 274 SUPERFAMILY Aquaporin-like 36 268 IPR023271 -
Tpr4g1282 274 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 PRINTS Major intrinsic protein family signature 204 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 PRINTS Major intrinsic protein family signature 241 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g1282 274 ProSitePatterns MIP family signature. 108 116 IPR022357 -
Tpr4g1282 274 Gene3D Glycerol uptake facilitator protein. 29 272 IPR023271 -
Tpr4g1282 274 PANTHER AQUAPORIN TIP5-1-RELATED 31 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1282 Tpr-Chr4 12402637 12404305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1282 25 268 Major Intrinsic Protein MIP AT3G47440 62.295 1.24e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1282 K09873 - gmx:100801448 413.69