Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1277 ATGGCAAAGAAGAAGAAGAGTTGGTTTAATCTAGTGAAGAGGCTTTTCATATGGGATACACATTCAACACAAGAGAAGGAGAAAAGAAGAAAATGGATATTTGGAAAGTTAAAGACCAAGAAGTTACCTTCAATAACAGCTCCACCAACAACCTTAAAAGAAACAAAACCAAATGAAGCAGAGAAGGAAAAAACCAAGAATTCTGAAGCTGCAGTTACAGCTCCTGAAGTTGTTATTCTCAGTGATGTTTCAAAAGATAACACAGCAGAATCTGAAACTTTTAAAACTGTGAATGGTGTTTCTCAATCGATATATCAGTGCCAGAAAGTGATTCAAGAATTTGCAGCCATTAAAATTCAAACTGCCTTTAGGGGTTATCTAGCAAAGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAACTTCAAGCTATCATTCGCGGAAGAGCAGTGAGACGCCAAGCTATGAGTACTCTTAAGAGCTTACAGTCCATTGTAAGTATCCAATCGAAGATATGTGCAAGGAGAATGCAAATGGTTGAAGGAAGATGGGAGGATTGTGTTGAAGATGAAGACATGCATTATTCTAAAGACAAGATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGTAGATGCTTCTTGCATGATCAAGAAAGAAGCCATTATTAAGAGAGAAAGAATAAAAGAATACACATTTAATCATAGAAGGTCAGCCGAGTCAGAAAGAAGTAAAGTGAATGGAAGATGGAGATACTGGTTGGAGCAATGGGTAGATACACAACTTACAAAAAGCAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCAAATTCTAAAACTGCTGAAGAATTTGGAACAAGACAACTTAAGCTGCGAAATACTACTCAAAGACAAAATCAAAATCCACTTGAAGGATTGGATTCACCAATACTTTTATCGAGAAAATCTTTTCCTCATAGGCGACAATGTTCAATAGAAGATCAATCATTTTCAAGCTCGCCTGCAACACCAGCATACATGGCTGCTACTGAATCAGCAAAAGCAAAAGCAAGATCAACAAGTTCACCAAAAGCAAGGTCATGGAATTATGACATGAATTCAGATAGCTATTTATCACCTTGCAAGAAAAAGTTATCAATTGTTTCATCTGTTAACAGTGATGTGCTTAATAGTGGTGGTAGAATGGGAAAGCTTAGTGGTAGTAATCAACAAAGATCACCAAGTCTGAAGGGTATTTCAGTGCCTATAAAATCAAGCAGGACTATCATAAAGGATCTTAGCATTAATTCAGATTGCTCATTGCCTAATTGGGATAGACAAAGTTCATTCAGATGA 1365 0.3685 MAKKKKSWFNLVKRLFIWDTHSTQEKEKRRKWIFGKLKTKKLPSITAPPTTLKETKPNEAEKEKTKNSEAAVTAPEVVILSDVSKDNTAESETFKTVNGVSQSIYQCQKVIQEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSKICARRMQMVEGRWEDCVEDEDMHYSKDKIIRMDSNSERKWDDSTLLKEEVDASCMIKKEAIIKRERIKEYTFNHRRSAESERSKVNGRWRYWLEQWVDTQLTKSKELEDLDSVFSSNSKTAEEFGTRQLKLRNTTQRQNQNPLEGLDSPILLSRKSFPHRRQCSIEDQSFSSSPATPAYMAATESAKAKARSTSSPKARSWNYDMNSDSYLSPCKKKLSIVSSVNSDVLNSGGRMGKLSGSNQQRSPSLKGISVPIKSSRTIIKDLSINSDCSLPNWDRQSSFR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1277 454 PANTHER IQ-DOMAIN 5-RELATED 6 440 - -
Tpr4g1277 454 PANTHER IQ-DOMAIN 11 6 440 - -
Tpr4g1277 454 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Tpr4g1277 454 Gene3D - 111 165 - -
Tpr4g1277 454 MobiDBLite consensus disorder prediction 405 424 - -
Tpr4g1277 454 MobiDBLite consensus disorder prediction 295 316 - -
Tpr4g1277 454 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Tpr4g1277 454 Pfam Protein of unknown function (DUF4005) 336 409 IPR025064 -
Tpr4g1277 454 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Tpr4g1277 454 MobiDBLite consensus disorder prediction 295 318 - -
Tpr4g1277 454 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1277 Tpr-Chr4 12341647 12345494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1277 4 454 IQD Protein Family AT5G13460 47.890 5.39e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1277 - - gmx:100800192 642.499