Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1270 ATGGTTGATATGCTAAGTTCATTTATCTCTGCTATCTTGCAAGTACTATTGGATAGGATAGCTAATCCTGATCTCGTAGATTTCTTTCGAGGAAACCATCTTGATGAGGCACTTCTAGAGAAGTTGAAGATGCTTTTACTATCTGTCATTACAGTTCTTAATGATGCTGAGGAGAAACAGTTTGTTGATCCATTGGTGAAGGAGTGGGTTGATAGGCTTAAGAATGTTGCTTATGATGCTGATGATGTCTTGGATGAGATTGCCACCAAAGCCATACAAGACAAGATGGATCCTAGGTTTCAGACAACCTTAAATCAGGTAAAAGATTATGCTTCTTCTCTTAATCCTTTTTCCGAAAGAGTTCAATCAAAAATTGGTAGGATAGTTGAGAGGTTGAAGTCTATATTAGAGCATAAAAATATTCTTGGTCTTAAGGAAGGAGGTGTAGGTAAATCACTATCGTTCGGTTCAGCTACGACTTCTTTGGTCAATGAACATCGTGTGTATGGTAGAGATGGTGATAGGGAGAAGATTATTGACTTTTTGTTAGCAGGAGATTCCAGTGGAGAGGGGGTGCCGGTTGTTGCGATTGTTGGGATGGGAGGGATAGGTAAGACTACTCTTGCTCAAATTTTGTACAATGACGAACGGGTGAGAAACCATTTTCAATCTAGATCATGGGCATTTGTTTCAGACACTTCAAATGTGTATGAAATGACCAAAAAAGTTTTCGAGTCTTTTACTTTGTCGCATTCTAATATCTCAGACTTGAATATACTCCAAATCAAACTTAAGGTTAGATTGGCGAGAAAACGGTTTCTACTTGTTTTAGATGGTTTTCAAAATGAGAACTTTCTAGACTGGGACATCCTGCAAAGACCCTTTTTATCGGGAAACTATGGGAGTAGAATCATTGTCACCACACGTAGTCAAAGTGTTGCTACGTTGATTCGTGCTGATTTAACTCATTCTCTCTCGCTTTTATCTCATGATGATACTTGGAAGTTATTCGCAAGTCATGCATTCAAATCAGGGAACCCGAATGATGAGCTTCCTATCTTGGCTCAAATTGGCCAAAAAATAGTGAAAAAGTGCAACGGTCTCCCTCTAGCCGCAAAAGCACTAGGGAGTCTCTTACGTACTAAAGTAGATGAAGAGAAATGGAAATGTGTATGTTATAGTAGGATATGGGAGTTACCAAGTGATAAGTGTAGCATTCTTCCTGCTTTAAGATTGAGTTATAGTCATCTACCTTCTCATTTAAAGCGATGTTTTAGTTATTGTTCCATATTTCCGAAAGGTTTTGAAATACAAAAACAGAACTTGATCTATTTATGGATGGCGGAAGGTATCCTACCACCACAAAAAACAAAGAAGAGAATGGAAGATGTAGGAGAAGAATGCTTTCAAGAGTTACTATCTAGGTCATTCTTTTATCGGTCAACATACCACATATCACATTATATGATGCATGACCTTATCCATGATGTAGCACAGTTTGTTGCAGGCGAATTCTATTACAACTTAGATGATAATAATCCTAGAAAAGTGACGATTATTGTTCGCCATTTATCTTATTTACAAGGCATATATGATGATCCTGAAAAGTTCGAGATCTTCTCTGAATTTAAGCAGCTTAGGACCTTCATACCATTCAAATTCTCATATTTTGTTTACTCTTCTTCAATTACTAGCATGGTTTCTATTTTGTTACCAAAATTGAAACGCTTGCGTGTGCTCTCTTTATCTCATTATCCAATTACAAAGTTGCCAGATTCAATTGGAAACTTGTTGCATTTGCGATATTTAGATCTTTCTTACACTGGAATTGAGTGTTTGCCTGATTCTATTAGCACTTTGTATAATTTGGAGACATTGTTGTTGTCAAGTTGTCGTAGCCTCATTATGTTACCAGAAAACATGTCCAACCTTGTCAACTTGCGCCAACTTGATATTAGTGGATGCACCGTGACACAAATGCCTGCAAATTTTGGTAAATTGAAGTCTCTTCAAGTGTTGACAAGTTTTGTAATAGGCAACAAAAGGGGATCGAAAATCAGTGAGTTAGGGGAGCTTTCAAACCTCCATGGAGCACTTTTGATCGGGGGCCTGCAGAATGTTATCGATCCAACAGAAGCTTCCGATGCCAGGTTAAAGAGAAAGAAATATCTCCGTGAAGTAGAATTCAAGTGGACAACTATAACTCATGACCAAGAGAGTGAAACTAATGTCCTCGACATGCTAGAGCCACATAAGAATGTGGAAAGTCTTAAAATTCAAAATTTTGGCGGAAATAAATTGCCAAATTGGTTAGGGAGCTCTTCATTCTCTAATATGGTGTTTCTACATCTTGCTAATTGTGAAAATTGCAAGTCATTGCCGTCGCTTGGACAATTGTCTTCCCTCACAGAACTTTGTATATCAAATATGAAAAGCCTGCAAAAAGTTGGTCAAGAATTCTATGGAAATGGAATTGAGTCGTTCAAATTATTGAAAATTTTGAAGTTTGAAGACATGCCCAATTGGGAAGAATGGTCACCCAACAGATTTGAAGAAAATGGACAATTCCCTTCGCTGCGCGAACTTTACATAGAGAGATGTCCTAAATTGACTACAAAGTTACCTGATCACCTTCCTTCCTTGGATAAATTGGTGATAACTGCATGTCAAGCTCTCACAAATCCAATGCCATGCGTTCCACGATTGAGAGAATTAATGTTAACTGGTTGCGATGCATTATCGTCATTATCCGAGAAAATGATGCAGGGAAATAAATGTCTTCAATTCATGGTCATAAGTAATTGCTCATCTCTCGTCAACATCTCCATGGATAGTCTACCAAGTACGCTAAGATCTCTTGAAATCTACGAATGCAGAAATTTACAACTATTTCACTCTGAAAGTTCGATGCAACAATCTCAATGTTATTCCGCCCTTGAAAAATTACACTTAAAATGTAGTTGTGATTCTCTCATCTCATTTCCGTTATTACTCTTCAACAAGCTCGAAGATCTACATATACAAGATTGTAGCAACCTCGAGTTTATTTCATCTGCTCCAAATAGTCTCCCATGTTTTCGAAAGTTAAAACTAAAGCAATGCTCGAAACTGGCTCAATTTCCTGAAGGAGGATTCCATGCTCCCAAACTAGAATCACTTTCTATCAGCAAATGTGTCGATTTCTCATCTGAGATTTCATGGGGTCTTCAAACAATGACATCACTAACTTCTCTTTGTATCAGCGGTCTTCCTAGTCTTACTTCATTGGAGCATACAGGAGTTCAATACCTAACATCTCTCAAAAGTTTGAAGATTAAAGATTGTGCTAATCTTGGATCTCTTCCTTTAGACAAACTAGTTATCTCTCTTTCTCATCTTACTATTAGAGCATGTCCATTGTTAAAAGTGCTATGTGAAAAGGATATTGGACAATATTGGAGTATGGTTTCTCTCATACCTTTCAGAATCATTGAAGACTAG 3480 0.3756 MVDMLSSFISAILQVLLDRIANPDLVDFFRGNHLDEALLEKLKMLLLSVITVLNDAEEKQFVDPLVKEWVDRLKNVAYDADDVLDEIATKAIQDKMDPRFQTTLNQVKDYASSLNPFSERVQSKIGRIVERLKSILEHKNILGLKEGGVGKSLSFGSATTSLVNEHRVYGRDGDREKIIDFLLAGDSSGEGVPVVAIVGMGGIGKTTLAQILYNDERVRNHFQSRSWAFVSDTSNVYEMTKKVFESFTLSHSNISDLNILQIKLKVRLARKRFLLVLDGFQNENFLDWDILQRPFLSGNYGSRIIVTTRSQSVATLIRADLTHSLSLLSHDDTWKLFASHAFKSGNPNDELPILAQIGQKIVKKCNGLPLAAKALGSLLRTKVDEEKWKCVCYSRIWELPSDKCSILPALRLSYSHLPSHLKRCFSYCSIFPKGFEIQKQNLIYLWMAEGILPPQKTKKRMEDVGEECFQELLSRSFFYRSTYHISHYMMHDLIHDVAQFVAGEFYYNLDDNNPRKVTIIVRHLSYLQGIYDDPEKFEIFSEFKQLRTFIPFKFSYFVYSSSITSMVSILLPKLKRLRVLSLSHYPITKLPDSIGNLLHLRYLDLSYTGIECLPDSISTLYNLETLLLSSCRSLIMLPENMSNLVNLRQLDISGCTVTQMPANFGKLKSLQVLTSFVIGNKRGSKISELGELSNLHGALLIGGLQNVIDPTEASDARLKRKKYLREVEFKWTTITHDQESETNVLDMLEPHKNVESLKIQNFGGNKLPNWLGSSSFSNMVFLHLANCENCKSLPSLGQLSSLTELCISNMKSLQKVGQEFYGNGIESFKLLKILKFEDMPNWEEWSPNRFEENGQFPSLRELYIERCPKLTTKLPDHLPSLDKLVITACQALTNPMPCVPRLRELMLTGCDALSSLSEKMMQGNKCLQFMVISNCSSLVNISMDSLPSTLRSLEIYECRNLQLFHSESSMQQSQCYSALEKLHLKCSCDSLISFPLLLFNKLEDLHIQDCSNLEFISSAPNSLPCFRKLKLKQCSKLAQFPEGGFHAPKLESLSISKCVDFSSEISWGLQTMTSLTSLCISGLPSLTSLEHTGVQYLTSLKSLKIKDCANLGSLPLDKLVISLSHLTIRACPLLKVLCEKDIGQYWSMVSLIPFRIIED* 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1270 1159 SUPERFAMILY L domain-like 490 889 - -
Tpr4g1270 1159 Gene3D Ribonuclease Inhibitor 897 1152 IPR032675 -
Tpr4g1270 1159 Gene3D - 413 500 IPR036388 -
Tpr4g1270 1159 SMART LRR_typ_2 597 620 IPR003591 -
Tpr4g1270 1159 SMART LRR_typ_2 644 667 IPR003591 -
Tpr4g1270 1159 SMART LRR_typ_2 574 596 IPR003591 -
Tpr4g1270 1159 PANTHER DISEASE RESISTANCE PROTEIN RP 53 938 IPR044974 GO:0006952
Tpr4g1270 1159 Gene3D - 155 322 IPR027417 -
Tpr4g1270 1159 CDD RX-CC_like 53 135 IPR038005 -
Tpr4g1270 1159 SUPERFAMILY RNI-like 855 1138 - -
Tpr4g1270 1159 Gene3D - 327 412 IPR042197 -
Tpr4g1270 1159 Gene3D Ribonuclease Inhibitor 558 707 IPR032675 -
Tpr4g1270 1159 Gene3D Ribonuclease Inhibitor 712 896 IPR032675 -
Tpr4g1270 1159 PANTHER - 53 938 - -
Tpr4g1270 1159 Pfam NB-ARC domain 174 392 IPR002182 GO:0043531
Tpr4g1270 1159 Gene3D - 33 134 - -
Tpr4g1270 1159 Pfam Rx N-terminal domain 8 101 IPR041118 -
Tpr4g1270 1159 Pfam Leucine rich repeat 576 632 IPR001611 GO:0005515
Tpr4g1270 1159 PRINTS Disease resistance protein signature 194 209 - -
Tpr4g1270 1159 PRINTS Disease resistance protein signature 267 281 - -
Tpr4g1270 1159 PRINTS Disease resistance protein signature 365 379 - -
Tpr4g1270 1159 PRINTS Disease resistance protein signature 618 634 - -
Tpr4g1270 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 428 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1270 Tpr-Chr4 12251538 12255420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1270 195 674 WRKY Transcription Factor Family AT5G45050 23.719 1.18e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1270 - - cam:101492735 1835.85