Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1259 ATGGATACCACAAAGGATCATCAAAATGTTGTTACCTTAGATGTCCATGCTGCCAAAAATTTGTTACATTCATCTGGTTACAATTATCTTGATGTGAGGTCAGTGGAGGAATTCAATAAAAGTCATGTTGAGAATGCTATTAATGTCCCCTATATGTTCAACACAGAAGAAGGGCGTGTGAAAAATCCGGATTTTGTTAACCAAGTAGAAGCAGTATTTAAGAGTGATGATCATTTAATTGTCGCTTGCAATTCTGGAGGAAGATCAAGTCGAGCTTGGGTTGATCTCAATAATTTTGGATTTAAACATATTGTTAACATGGGAGGAGGCTACTCTGCATGGGTGGATGCTGGATTTGCAGGTGATGACAAGCCTGCAGAGGAACTTAAAACAGCTTGCATGTTCCGTCCATAA 414 0.3889 MDTTKDHQNVVTLDVHAAKNLLHSSGYNYLDVRSVEEFNKSHVENAINVPYMFNTEEGRVKNPDFVNQVEAVFKSDDHLIVACNSGGRSSRAWVDLNNFGFKHIVNMGGGYSAWVDAGFAGDDKPAEELKTACMFRP* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1259 137 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 134 - -
Tpr4g1259 137 SMART rhod_4 13 120 IPR001763 -
Tpr4g1259 137 CDD RHOD 18 115 - -
Tpr4g1259 137 Pfam Rhodanese-like domain 18 116 IPR001763 -
Tpr4g1259 137 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Tpr4g1259 137 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 134 IPR044684 GO:0003824
Tpr4g1259 137 Gene3D - 2 120 IPR036873 -
Tpr4g1259 137 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1259 Tpr-Chr4 12164017 12165799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1259 1 119 Sulfurtransferasese or Rhodanese AT5G66170 45.455 3.31e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1259 K22547 - gmx:100794624 222.246