Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1258 ATGGGTTACCTCAATCTTTCTTGCAAAGCTGAATCATCAATCTCAACCTCAAATTCTCTATCATCATCATCAACATCATCAAAACCAAACAAAGATAAAGACAAAGAAAAAACCATCAAGATCCAACAGTTTCAATACAGTGATCTTGAAGCAGCAACAAACAATTTCTCAAACAACCAACTTCTTGGTAAAGGTAGTCATGGTTATGTCTACAAAGCAATTGTTCATGGTAAACCTGTAGCTGTAAAAAGACCATCAAGACCTCACTCTCTTCTCAATCATAACAGACCCATCTCATCATCTTCACCTGAAATCACCAATGAAGTCGATAACGAAATCGATATTTTATCGAAAATTCAAAGTCCCAGGTTGGTTAATCTTGTTGGGTTTACAAATGATTCAAAAGATAGACTTTTGGTTGTTGAATTTATGTGTAATGGTACCCTTTTTGATGTTCTTCATTCTTCTTCAAGAACCCTTAATTGGGGTAGAAGAATTCGTTTAGCTTTTCAAACTGCTAAAGCTATTGATATACTTCATTCATCAAATCCACCTGTTATTCATAGAGATATTAAATCTGCTAATGTTCTTATTGATCAAAATTATAATGCTAGATTAGGTGATTTTGGTTTAGCATTAATGGGTTTTGATAGGGTAAGGTCAACTCCACCTGCTGGTACAATGGGTTATCTTGATCCTTTTTATGTTACACCTGATAATTTGAGTACTAAAATTGATGTTTTTAGTTTTGGGATTTTGTTGTTGGAGATTATAAGTGGTAGGAAAGCAATTGATGTTGCTTATTCGCCGCCATCGGTTGTGGATTGGGCTATTCCACTTATTAAGAAAGGGAAAATTTTTGCTGTTTATGATCCTAGAATACCACCTCCTAAGGATGCTTTTGTGAGGAAACAATTGGCTTTGATTGCGGCGAAATGTGTTAGGTCTTGTAGGGAAAGAAGGCCTTCGATGAACGAGGTTGTTAATTGGCTTTGTGGGTTGTGTAAATTGGTTCCGAATCATTCGTGGAATGGTTTTAATATTAATAACCCTTGTATGATGGTTGAAAATGTTGGACGTCCGGTTGAACCGAGAAATGGTCAGTTACGTAGTTCGAGGTTTGCGGAAGAAGGGAATTTTGGTGGTTCGGTGGATGCTAGATTGTCGAAGTCTGCATTGAGATATTCGAGGAGAGTGTATTCGGATTTGGGGTTTAGTAGTAATTTAATGGATCTTATGGCTACGACTGAGGAGGCGGAGTTTATACGAGATGCTGATGGTGTTGTTCAACCTAGTTCTTCTAAATCAGTTGAACAAGTTTCTAGTTCTAGATTTGGCAGTGGAAGATATTTTGCAAGAGGTAAAAATCTATACCGGCCTTGTGGTACTGATAAAGATGCTTTTGGGTTGAGTAAAGGCCAGATTGTTGGGGAGAATTCTTCAAATTTAAAGCAGGATGAGGTTTCTGAATCAACTTTAACTTCTCTTGCAACTGAGGTTATCTAG 1506 0.3705 MGYLNLSCKAESSISTSNSLSSSSTSSKPNKDKDKEKTIKIQQFQYSDLEAATNNFSNNQLLGKGSHGYVYKAIVHGKPVAVKRPSRPHSLLNHNRPISSSSPEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMCNGTLFDVLHSSSRTLNWGRRIRLAFQTAKAIDILHSSNPPVIHRDIKSANVLIDQNYNARLGDFGLALMGFDRVRSTPPAGTMGYLDPFYVTPDNLSTKIDVFSFGILLLEIISGRKAIDVAYSPPSVVDWAIPLIKKGKIFAVYDPRIPPPKDAFVRKQLALIAAKCVRSCRERRPSMNEVVNWLCGLCKLVPNHSWNGFNINNPCMMVENVGRPVEPRNGQLRSSRFAEEGNFGGSVDARLSKSALRYSRRVYSDLGFSSNLMDLMATTEEAEFIRDADGVVQPSSSKSVEQVSSSRFGSGRYFARGKNLYRPCGTDKDAFGLSKGQIVGENSSNLKQDEVSESTLTSLATEVI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1258 501 Gene3D Phosphorylase Kinase; domain 1 26 143 - -
Tpr4g1258 501 SMART serkin_6 56 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1258 501 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Tpr4g1258 501 SUPERFAMILY Protein kinase-like (PK-like) 39 340 IPR011009 -
Tpr4g1258 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Tpr4g1258 501 MobiDBLite consensus disorder prediction 8 27 - -
Tpr4g1258 501 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Tpr4g1258 501 PANTHER OS01G0750732 PROTEIN 1 485 - -
Tpr4g1258 501 MobiDBLite consensus disorder prediction 1 36 - -
Tpr4g1258 501 MobiDBLite consensus disorder prediction 84 104 - -
Tpr4g1258 501 Pfam Protein kinase domain 57 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1258 501 ProSiteProfiles Protein kinase domain profile. 56 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1258 501 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1258 Tpr-Chr4 12144462 12146718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1258 5 331 Receptor kinase-like Gene Family AT3G59420 40.356 2.44e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tpr4g1258 Pkinase 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1258 - - gmx:100805692 699.508